Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03608 ATGGATTCTTTTTCATCATCTTCGAATCGACAATGGATAAACGACGTGTTCATTAATTTTAGAGGAGAAGATACTCGTAAGAGTTTCGTTTCTCATCTCCATGCTGCACTCTCTAATGCCGGAATCAACACTTACATAGACAATCAACTTCACAAGGGACAGGAGTTAGGACCAGAACTGTCCCGGGCAATAGAATGGTCTCATATATCCATTGTTGTCTTCTCCAAAAGATATACTGAATCATATTGGTGTCTTAACGAACTGAAAAAGGTTATGGAATGCCATAGAAACCACGGCCAGCTGGTTCTGCCTATATTTTACGATGTTGATCCATCCGTTGTGCGTCGTCAGAGTGGTGATTTTGGAGAAGCTTTGCTATCTACAGCAGAAAAAAGTTACTCCTCAGGAGAGGAGAGGATGGAATATGTGCTGTCCAAGTGGAGGAGTGCACTCACCCAAGCTGCTAATTTGTCTGGCTGGGATGTCAACAATTGCAGGAGTGAAGCTGAACTAATGCAGCAAATTGTTGAGAACGTTTTGGAAAAACTAAATACCGGATTCTTGCCTATTACCGATTTTCCTGTTGGATTGGAATCCCGTGTGCATGAAGTGGTTGAATTTATTGTAACTCAGCCAAACAGACTCTGTATGATAGGAATATGGGGAATGGGTGGATCGGGTAAAACAACCACAGCTAAAGCCATCTACAATCAAATTCATCGCAAATTTGTGGATAAATGTTTCATTGAAAATATTAGAGAAATTTGTGAAAAAGATAATAGAGGGATTATTCATGTACAACAGCAACTACTTTCAGATATCTTGAATTCAAAGGAGATGATACCTAACATTGCATTGGGAACAACTATTATAGAGAGAAGGCTTCAGGGGAAAAGGGTGCTCGTTGTGCTTGATGATGTGACCACATTTAAACAGTTAAAAGCACTCTTTCGAAATCTAACATTTTTTGGCTCAGGAAGTGTTTTCATAGTTACGACCAGGGATGCACGTATACTTAAGTTACTTGAAGTTAGCCATGTTTGTACAATGAAGGAAATGGACGAAAAAGAGTCCCTTGAGCTTTTCTGTTGGCACGCTTTTAGACAACCTATTCCGATGATAGAATTCAGTGAACTCTCAAGAAGCGTAGCTGCTTATTGCGGAGGATTACCATTGGCTCTTGAAGTCATCGGTTCTTCCTTATATGAAAGGACAAAAGAAGAATGGGAAAGTGTACTCTCAAAATTAGAGAGAATTCCTAATGATCAAGTGCAAGAGAAACTGAGAACAAGCTATGATGGTTTAAAGGATGATATGGAAAAGGATATATTTCTTGACATATGTTGTTTCTTTATCGGAAAGGACAGATCCTATGTTACAAAGATACTAAATGGCTGTAAACTTCATGCTGATATTGGAATAACCATCCTCATAGAACGGTGCCTTGTAAAAATTGAAAGGAATAACAAACTTGGGATGCATGATTTAACAAGAGACATGGGAAGAGAAATTGTTCGTAAAAGTTCAGCAAAAGAGCCTGGGAAGCGTAGTCGGTTATGGTTTCACCAGGATGTACATGATATTTTGACCAAAAATTCTGGAACGGAAACTGTTGAGGGTTTGGTTTTAAAGTTGCAAAGAACCAGTAGAGTAAGCTTCAATGCTAATTCTTTCAAGGAGATGAAGAATATGAGACTTCTACAACTTGATTGTGTTGACCTTGCTGGAGATTATGGGTGTCTTTCTAAAGAGCTTAGATGGGTATGTTGGCAAGAATTTACCATGAACTATATACCTGATGACTTTTATCTGGGAAATTTAGTTGTTATCGACTTAAAACACAGCAATATCAAACAAGTTTGGAATGAAACCAAGTTGTTGGGGAACCTAAAAATTCTCAATCTCAGTCATTCCAAGTACTTGAAAAGCACTCCTGACTTTTCAAAATCGCCAAATCTGGAAAAACTCATCATGAAGAATTGTCCAAACTTGTCTGAGGTGCACCAGTCCATTGGAGATCTGAGAAGTCTTCTTCTGATAAATTTGAAGGACTGTAAAAGTCTTAACAATCTTCCAGAGAATATATATCAATTGAAATCTTTGAAAACTCTCATCCTTTCTGGTTGTACAAAGATTGACAAGTTGGAAGAAGACATAGTGCAGATGGAATCCTTAACAACACTGATTGCAAAAGATACGGCTATAAAAGAGGTGCCCTATTCAATAGTAAGATCGAGAAACATTGAATATATATCCCTATGCGGATATGAAGGATTAACACGTGATGTTTTTCCTTCTCTCATTTGGTCTTGGATGTCACCAACAATGAATTCTCTACCCCAAATTTCTCCAATTGGAAACATGGCTCTGTCTTTAACTTCCATTAATGCACAGAATAATAACATGGGCTTTCTATCACCAATGATTAGGAGCCTTTCACAGCTCAGAACTGTTTGGCTACAATGTCGCTCAAAGACTCAACTAACACAAGAGTTACGAAGAATTCTTGATGATAAATATGATGTAAATTTTACCAAATGGGAAACATCATCTTCATCTCATATCACAAATCTTTTCTTGAGATCGCTTTTGATTGGAATGGGAAGTTGTCACATAGTCATTGATGCTCTTGGAAAAAGCATATCACAGGGATTAACTGCCAATGATTCCAGTGGTTTTTTCCTTCCATGTGGAAACTATCCTTCTTGTTTAGGCTATACAGGGGAAGGACCTTCAGCACTATTTCAAGTTCCTAAGGATATTGATCATCAATTGAAGGGAATAATATTATGTGTTGTTTATTCATCAACATCTGAAAACATGGGAGCTGAATGTCTTACTAGTGTCTTAATCGTTAATTACACGAAGTGCACCATCCAGATATACAAGCGAGACACAGTAATGTCCTTTAATGGTGAGGATTGGAAGAATGTATCATCGAATCTAGGACCGGGTGATGATGTGGAGATTTTTGTAGCTTTTGGACATGGATTGATCGTTAAGGAGACAGCTGTTTATCTAATATATGGCCAGTCAATTACTATGGAAATTGAGTCTTCAACGAACATGGAAATGGAGCTATCAGCTAACGTCAAAGTGGAGGCATCAATTACTACGGAAATTGAACAATCAATTACTATGGAAGTTGAGTTACCAACTAACACGGAAATGGAGCCATTAGCCAAAATGGACGTGCAGCCGTCACCTGAAGGGAACATGCAACCATCACCTAATGTGACAGTCGAGGCATCAACTAATGTTAAAACCAATCAGTCGCCAGAAGTGAAGGTGCGCTCATCAGGTATCATAAAAACGAATCCATCACCAGCTCCAAAAAAAAGTATATTTACAAGACTTGCAAAAAGAATAGGTAGATGTTTATGCTGTAACTAG 3393 0.3823 MDSFSSSSNRQWINDVFINFRGEDTRKSFVSHLHAALSNAGINTYIDNQLHKGQELGPELSRAIEWSHISIVVFSKRYTESYWCLNELKKVMECHRNHGQLVLPIFYDVDPSVVRRQSGDFGEALLSTAEKSYSSGEERMEYVLSKWRSALTQAANLSGWDVNNCRSEAELMQQIVENVLEKLNTGFLPITDFPVGLESRVHEVVEFIVTQPNRLCMIGIWGMGGSGKTTTAKAIYNQIHRKFVDKCFIENIREICEKDNRGIIHVQQQLLSDILNSKEMIPNIALGTTIIERRLQGKRVLVVLDDVTTFKQLKALFRNLTFFGSGSVFIVTTRDARILKLLEVSHVCTMKEMDEKESLELFCWHAFRQPIPMIEFSELSRSVAAYCGGLPLALEVIGSSLYERTKEEWESVLSKLERIPNDQVQEKLRTSYDGLKDDMEKDIFLDICCFFIGKDRSYVTKILNGCKLHADIGITILIERCLVKIERNNKLGMHDLTRDMGREIVRKSSAKEPGKRSRLWFHQDVHDILTKNSGTETVEGLVLKLQRTSRVSFNANSFKEMKNMRLLQLDCVDLAGDYGCLSKELRWVCWQEFTMNYIPDDFYLGNLVVIDLKHSNIKQVWNETKLLGNLKILNLSHSKYLKSTPDFSKSPNLEKLIMKNCPNLSEVHQSIGDLRSLLLINLKDCKSLNNLPENIYQLKSLKTLILSGCTKIDKLEEDIVQMESLTTLIAKDTAIKEVPYSIVRSRNIEYISLCGYEGLTRDVFPSLIWSWMSPTMNSLPQISPIGNMALSLTSINAQNNNMGFLSPMIRSLSQLRTVWLQCRSKTQLTQELRRILDDKYDVNFTKWETSSSSHITNLFLRSLLIGMGSCHIVIDALGKSISQGLTANDSSGFFLPCGNYPSCLGYTGEGPSALFQVPKDIDHQLKGIILCVVYSSTSENMGAECLTSVLIVNYTKCTIQIYKRDTVMSFNGEDWKNVSSNLGPGDDVEIFVAFGHGLIVKETAVYLIYGQSITMEIESSTNMEMELSANVKVEASITTEIEQSITMEVELPTNTEMEPLAKMDVQPSPEGNMQPSPNVTVEASTNVKTNQSPEVKVRSSGIIKTNPSPAPKKSIFTRLAKRIGRCLCCN 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03608 1130 Gene3D - 352 436 IPR042197 -
Vivi7g03608 1130 Pfam NB-ARC domain 198 433 IPR002182 GO:0043531
Vivi7g03608 1130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 447 IPR027417 -
Vivi7g03608 1130 Pfam TIR domain 15 185 IPR000157 GO:0007165
Vivi7g03608 1130 Gene3D - 7 185 IPR035897 -
Vivi7g03608 1130 Gene3D Ribonuclease Inhibitor 525 859 IPR032675 -
Vivi7g03608 1130 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 185 - -
Vivi7g03608 1130 PRINTS Disease resistance protein signature 387 401 - -
Vivi7g03608 1130 PRINTS Disease resistance protein signature 696 712 - -
Vivi7g03608 1130 PRINTS Disease resistance protein signature 217 232 - -
Vivi7g03608 1130 PRINTS Disease resistance protein signature 294 308 - -
Vivi7g03608 1130 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 739 IPR044974 GO:0006952
Vivi7g03608 1130 SMART till_3 13 157 IPR000157 GO:0007165
Vivi7g03608 1130 ProSiteProfiles TIR domain profile. 12 183 IPR000157 GO:0007165
Vivi7g03608 1130 SUPERFAMILY L domain-like 493 822 - -
Vivi7g03608 1130 MobiDBLite consensus disorder prediction 1084 1109 - -
Vivi7g03608 1130 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 160 IPR035897 -
Vivi7g03608 1130 Gene3D - 186 348 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03608 Vivi-Chr7 101735164 101739653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03608 4 742 WRKY Transcription Factor Family AT4G12020 29.358 2.75e-81 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03608 - - mtr:11424959 1372.84