Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03605 ATGAGCAGCAGCAAAAACAACCAAACCGAAACAGCACACTCCCTAGATTTCAAAAAACTAAAAATCATATCCGCGGTAGGACGCGGCGCCAAAGGCGTCGTGTTTCTGGCGCGAACCGGTAACCGGTCATCAGACGAGTGCCTTGCTCTGAAAGTAACATCCAAAGCTCTCTTAGATCAAAAGAACGCAAAGAACAATTCAAAAGGCTCTGGAGAATACAAGAGAGCGTCGTTTGAAGAAGAAGTGCTACGTCGTTTCGATCATCCTCTTCTACCACGGTTGCGAGGTGTTTTCGAAACCGAGAGAATCGTTGGATTCGCCATTGATTATTGCCATGGCGGTAACCTCCATTCTCTCAGAAAGAAACAAACTGAGAAAATGTTCTCCGATGATGCCATTAGGTTTTACGCTGCTGAATTGGTTCTTGCATTGGAGTATCTTCATGAGCAAGGAATAGTGTATAGAGATTTGAAACCAGAGAACGTGATGATTCAAGAAAACGGTCACATAATGCTCGTAGATTTCGATCTATCTACGAAGCTGAAATCAAAATCGCCGCCACCTAAATCACTGAGTAATGACTCGTCGGATAGATCTAAGTCTAACTTATCAAAAGAGAAACATGCAAAGAAGCGGTTGATCTCGCGATTCTCCCGATGTAACTCGGGGATCTCACCGTGTGACTCGGATTTTGACTCGCAACCAGGTGTGAACTCAGTGAATAGAAACGAGTCGGAATCGGTTGAATCAGTTGAAAAATCGAACTCGTTCGTTGGAACGGAGGATTACGTGGCACCTGAAATCGTACTTGGAAAAGGTCACGGTTTTGAAGTTGATTGGTGGTCGTTAGGTGTCGTTTTACACGAGATGCTGTATGGAACGACGCCGTTTAACGGGACCAATAGGAAAGAAACGTTTTACAGGATTTTGTCAAAGGAGCCTGAGTTAACGGGTGAGAAGACGGCGTTAAGGGACTTGATACGCAGATTGTTGGAAAAGGATCCTGACCGTAGGATCAAGGTGGATGAGATCAAGGGTCATGATTTCTTTAAAGGAGTTATGTGGGACAGAGTGGTTGAATTGGCAAGACCACCTTATATTCCTTGTTATGAAGTTGAGAATGAAAATACTAAAGGGTATAGTAAAAAATATGTGGAGGTTTTTGTTCATGAAGTGTTTTTTCCTGAGGGTGATGATAATAATGAAGAGAAAAAGAATAAAATGGAAGATAAAACAGGGTGGGTTGATAAATTGAGTAATAGTCTCAATGAGGATGAGGATTTTTTTATTTTTTGA 1296 0.4228 MSSSKNNQTETAHSLDFKKLKIISAVGRGAKGVVFLARTGNRSSDECLALKVTSKALLDQKNAKNNSKGSGEYKRASFEEEVLRRFDHPLLPRLRGVFETERIVGFAIDYCHGGNLHSLRKKQTEKMFSDDAIRFYAAELVLALEYLHEQGIVYRDLKPENVMIQENGHIMLVDFDLSTKLKSKSPPPKSLSNDSSDRSKSNLSKEKHAKKRLISRFSRCNSGISPCDSDFDSQPGVNSVNRNESESVESVEKSNSFVGTEDYVAPEIVLGKGHGFEVDWWSLGVVLHEMLYGTTPFNGTNRKETFYRILSKEPELTGEKTALRDLIRRLLEKDPDRRIKVDEIKGHDFFKGVMWDRVVELARPPYIPCYEVENENTKGYSKKYVEVFVHEVFFPEGDDNNEEKKNKMEDKTGWVDKLSNSLNEDEDFFIF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03605 431 ProSiteProfiles Protein kinase domain profile. 20 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03605 431 FunFam Serine/threonine-protein kinase OXI1 252 369 - -
Vivi7g03605 431 SMART serkin_6 20 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03605 431 Gene3D Phosphorylase Kinase; domain 1 20 114 - -
Vivi7g03605 431 MobiDBLite consensus disorder prediction 181 210 - -
Vivi7g03605 431 PANTHER FLIPPASE KINASE 1-RELATED 8 376 - -
Vivi7g03605 431 MobiDBLite consensus disorder prediction 183 198 - -
Vivi7g03605 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Vivi7g03605 431 Gene3D Transferase(Phosphotransferase) domain 1 115 184 - -
Vivi7g03605 431 Gene3D Transferase(Phosphotransferase) domain 1 250 369 - -
Vivi7g03605 431 Pfam Protein kinase domain 247 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03605 431 Pfam Protein kinase domain 22 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03605 431 MobiDBLite consensus disorder prediction 231 252 - -
Vivi7g03605 431 SUPERFAMILY Protein kinase-like (PK-like) 11 374 IPR011009 -
Vivi7g03605 431 FunFam Serine/threonine-protein kinase OXI1 115 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03605 Vivi-Chr7 101701517 101703429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03605 12 431 AGC Kinase Gene Family AT3G25250 55.196 2.96e-152 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi7g03605 Pkinase 1.3e-31 CL0016