Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03598 ATGCCTGAGCAAATTGTATCTGGTGTTGCTGAAAACCTCATTAACAGGTTGGCTTCTGCAGCTTTTCGAGAATTCGGAAGGATTTATGGTGTTATGGATGAATTGGAAAGGCTTAAGAGTACTCTTGACTCCATCAAAGCTGTGCTCCTTGATGCTGAAGACAAACAACAACAAAATCATGCGGTTCAAGTATGGATAAGAAGACTCAAAGATGATGTGATTCATCCTGCTGATAATTTGCTAGATGAATTTCTTATTCAAGATATGACTGATGAATCTCATAAGAACAAAATGACAAAGGTACTTCATTCCCTCTCTCTAAATAAGATTGCTTTTCGGAGTAGAATGGCTCATGGGATTGAAAAAATACAAAAGAAATTTAATGATGTTGTGAAAGATATGATTGGGTTGAATCTAAACCCAAATGCTGTGGTGGCTGAGCAAAGTAACAATGTAAATAGAGAAACTAGTTCTTATATGCCGGAATCAAATATCATCGGAAGAGAGGATGATAAAAAGAAGATCGTAAGCTTGTTGAGGCAATCACATGGAAATCAAAATGTCTCCGTGGTTGCTATTACAGGGATTGGTGGCTTGGGAAAGACAGCTCTTGCTCAATTGGTATATAATGATGCCGAAGTTGCAAAGATTTTTGAAAAGCATATGTGGGTATGTGTCTCTAATAAGTTTGATGTCAAAACTATTGTTAAGAAAATGTTGGAGTCATTAACTGAAAGCGAAATTAGCGATAAGTTACCATTGGAAAACATGCAGAAAATGCTTCGTGACAATTTAACGGGTAAGAAGTACTTGTTAGTCCTAGATGACATTTGGAATGAGAGTTTTGAAAAATGGACTCAATTGAGGATTTATTTGAAGTGTGGTGCTCAAGACAGTAAGGTTGTAGTGACAACTCGTACTAAAATTGTAGCACAAATAATGGGTGCAAGTGTCTCTTACACTCTGGATGGTTTGAATCCATTACAATCTTGGAGTTTGTTGAAGAACATTATTACAAATGGGGATGAGACTAAAGAAATGAATCATATTCTTGAACCAATTGGTAAGAAGATAGCAGAAAAGTGTAGCGGAGTTCCGCTTGTAATCAAAACACTGGGAGGCCTATTACAGGGTAAAAGTGAAAAAAAGGAATGGATTGCTATTTTACAAGGCGACTTTTGGAAATTATGTGAAGAGGAAGAAATCATCATGCCAGTGTTGAAACTAAGTTACCAAAACTTGTCGCCTCAACTAAGACAATGTTTTGCTCATTGCTCTTTATATCCTAAGGATCGGGTAATAGATAAGGATGAGTTGATTCAACTTTGGATGGCACAAGGTAATCTTGAATTTTCAGATGAAAAACAGACCATGGAAGCCATCGGTAACCATTTCGTGAATAATTTATTGATGAAGTCATTTTTCCAAGATGCTGAAGTAGATAGTGACCGTGATTTAACTAGTTTTAAAATGCACGATTTAATACATGATCTTGCCATGCAAGTAGCCGGCCACGATTGTTGTTACTTGGATAGTGAGACAAAAAGTGTTGTAGGAAGTCCCATGCATGTAATGTTCAGTGATGCTATTGGTTTGTTAGAATCATTGGATGCAAGCAGGGTGCGAACTTTAATTTTCGAGAACAACATTTCAGGAAATTGGTATGAGAAGGAATTGTCTGTGATTTCGAAATTCAAATACCTACGCTTTTTGAAGCTGTCATATTGTTCTATAAGTAAGTTGTGTGATTCAATTGGAAATTTGAAACATTTAAGATATCTTCAGTTGTGGTACTGTGCAGGACTAGAAGGCATTTTCAAATCTATTAGTAACATTGTTTGTCTTCAAACACTTATATTGGTTGAGTGTCGAGTATTTGAATTTTCTACAAAAGATGTCTTAAGTTTAATTAATTTGAGATATCTTCATATTGAAAATTTAAAAGCATTTAAAGAGAAGAAGACAACGGTTGGATTCGGAAAATTAAGCCTGGGGGAGCAGTATAAGGGTTTCATTTTTACCAACTGGCTTTCGTCCCTCACAAACATTGTGAAAATATTTCTTAGGAACTGTCAAGGTGTGCAATATCTCCAACCAATGGAACGTCTCCCATTCCTGAAGTATCTTTTTATAGGCGACCTTCATGAGTTGGAGTACATATATTATGAAGAGTCTCTTTTGTCTGAAGCATTCTTCCCTTCTTTGGAGGTTCTCAGAATTTTTAGATGCGAGAAGTTGAAGGGATGGTCGAGGATAAGGGATGAAAACTCTTCACAATCATATCATCTCTCCTTTTCGCCTTGTCTTTCTTACTTAACTATTGTTGATTGTCCAATGTTGACTCACATGCCTACTTTTCCAAACCTCGACAAGAAATTGGATTTCTTTGATTGTAATACGGACACATTAGAAGCAACATTAAACATGGTAAAGTCGAATTCTTCGATTGAATTCCCTCCACTTTCCTTGCTAAAATTCTTGATTCTTGGCGGACACGAGCTGGACGTGAAAACACTCCCAAATAATTGGATGGAAAATCTGACTTCTCTGAAACATCTTGAATTTTATAATCTTCCAAATCAAACATTTCAAGAAATTGAAGCTTGGTTTGAGGAAAGACTCAACTATCTTCCTTCCCTGCAAAAGATTAAAATTTCTCAATGTTTCGAGCTAGAGGCATTTCCTGTTTGGATTTGCAATCTCTCGTCACTTCAGCATATAACCATTTCGGAATGTCAAATTTTAGCTTCACTGCCCGATGGAATGCCTCATCTTACCAACTTACAGACCCTTGAAATCATTCAAAGTCCCCTTTTAGTTGAAGAATGCCGGAAAGAAACAAGTGCAACATCTCTCAAAATTGCTCACATCCCAAACATAATCTTAAAGTGA 2892 0.3651 MPEQIVSGVAENLINRLASAAFREFGRIYGVMDELERLKSTLDSIKAVLLDAEDKQQQNHAVQVWIRRLKDDVIHPADNLLDEFLIQDMTDESHKNKMTKVLHSLSLNKIAFRSRMAHGIEKIQKKFNDVVKDMIGLNLNPNAVVAEQSNNVNRETSSYMPESNIIGREDDKKKIVSLLRQSHGNQNVSVVAITGIGGLGKTALAQLVYNDAEVAKIFEKHMWVCVSNKFDVKTIVKKMLESLTESEISDKLPLENMQKMLRDNLTGKKYLLVLDDIWNESFEKWTQLRIYLKCGAQDSKVVVTTRTKIVAQIMGASVSYTLDGLNPLQSWSLLKNIITNGDETKEMNHILEPIGKKIAEKCSGVPLVIKTLGGLLQGKSEKKEWIAILQGDFWKLCEEEEIIMPVLKLSYQNLSPQLRQCFAHCSLYPKDRVIDKDELIQLWMAQGNLEFSDEKQTMEAIGNHFVNNLLMKSFFQDAEVDSDRDLTSFKMHDLIHDLAMQVAGHDCCYLDSETKSVVGSPMHVMFSDAIGLLESLDASRVRTLIFENNISGNWYEKELSVISKFKYLRFLKLSYCSISKLCDSIGNLKHLRYLQLWYCAGLEGIFKSISNIVCLQTLILVECRVFEFSTKDVLSLINLRYLHIENLKAFKEKKTTVGFGKLSLGEQYKGFIFTNWLSSLTNIVKIFLRNCQGVQYLQPMERLPFLKYLFIGDLHELEYIYYEESLLSEAFFPSLEVLRIFRCEKLKGWSRIRDENSSQSYHLSFSPCLSYLTIVDCPMLTHMPTFPNLDKKLDFFDCNTDTLEATLNMVKSNSSIEFPPLSLLKFLILGGHELDVKTLPNNWMENLTSLKHLEFYNLPNQTFQEIEAWFEERLNYLPSLQKIKISQCFELEAFPVWICNLSSLQHITISECQILASLPDGMPHLTNLQTLEIIQSPLLVEECRKETSATSLKIAHIPNIILK 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03598 963 PANTHER DISEASE RESISTANCE PROTEIN RP 35 777 IPR044974 GO:0006952
Vivi7g03598 963 FunFam Probable disease resistance protein At1g63360 411 501 - -
Vivi7g03598 963 Gene3D Ribonuclease Inhibitor 790 954 IPR032675 -
Vivi7g03598 963 Gene3D Ribonuclease Inhibitor 662 789 IPR032675 -
Vivi7g03598 963 Gene3D Ribonuclease Inhibitor 521 661 IPR032675 -
Vivi7g03598 963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 425 IPR027417 -
Vivi7g03598 963 Pfam NB-ARC domain 169 412 IPR002182 GO:0043531
Vivi7g03598 963 Gene3D - 325 410 IPR042197 -
Vivi7g03598 963 Gene3D - 411 502 IPR036388 -
Vivi7g03598 963 Pfam Rx N-terminal domain 11 98 IPR041118 -
Vivi7g03598 963 PRINTS Disease resistance protein signature 264 278 - -
Vivi7g03598 963 PRINTS Disease resistance protein signature 362 376 - -
Vivi7g03598 963 PRINTS Disease resistance protein signature 899 915 - -
Vivi7g03598 963 PRINTS Disease resistance protein signature 190 205 - -
Vivi7g03598 963 Gene3D - 146 320 IPR027417 -
Vivi7g03598 963 Coils Coil 35 55 - -
Vivi7g03598 963 FunFam Probable disease resistance protein At1g61300 147 318 - -
Vivi7g03598 963 Gene3D - 10 121 - -
Vivi7g03598 963 SUPERFAMILY RNI-like 539 939 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03598 Vivi-Chr7 101644464 101648819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03598 187 502 WRKY Transcription Factor Family AT5G45050 25.617 2.28e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03598 - - tpra:123883200 1240.71