Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03594 ATGGCTGAACAAGTTCCATATGGTGTTGCTGAAAGCCTCATTAACAGGTTGGCTTCTGCTGCTTTTCGTGAATTTGGGCGGATTTATGGAGTTATGGATGAATTGGAAAGGCTTAAGAATACTGTTGAGCTCATCAAAGCTGTGCTCCTTGATGCTGAAGACAAACAACAACAAAATCATGCCATACAGATCTGGATAAGACGACTCAAAGATGGTGTGCTTCATCCTACTGATGACTTGCTAGATGAGTTTCTTATTCACGATCTGAAACATAAAACTGATGAATCTCACAACAACACAATGACAAAGGTACTTCATTCCTTATCTCCAAGTAAGATTGCTTTTCGTGGTAGAATGGCCCGTGGGATTGAAAAAATACAAAAAAAGTTTAATGATATTGTGAAAGATATGACTGCGTTGAATCTAAACCCAAATGTTGTGGGAGCTGAGCAAAGTTGCAATGAAAAGAGAGAAACTAGTTCTTTTGTGTTGGAATCGGATATCGTTGGAAGAGAAGATGATAAAAACAATATTATAAACTTGTTGAGGCAACCACGTAGTAATCAAAATGTCTTTGTGGTTGCTATTGTTGGGATTGGTGGTTTGGGGAAGACAGCTCTTGCTCAGTTGGTATACAATGATGCTGAAGTAAAAGATATCTTTGAAAAACGTATGTGGCTATGTGTCTCTGATAACTTTGATGTCAAAACTATTCTTAAGAAAATGTTGGAGTCATTAACCAAAGGCAACATTGATGATATGTTATCATTGGAAGAGTTGCAGAATATGCTTCACGACAATTTAACGGGTAAGAAATACTTGTTAGTCCTAGATGACATTTGGAACGAGAGTTTTGAAAAATGGGCTCAGTTGAGGACTTATTTGATGTGTGGTGCTCAAGACAGTAAGGTTGTTGTGACAACTCGTAGCAAAATTGTAGCACAAACAATGGGTGTAAGTGTCCCATATACTCTAAATGGTTTGAATCCAATAGAATCTTGGAGTTTGTTGAAGAAAATTATCACATTTGGGGATGAGAATAAAGGAGTGAATCAAATTCTTGAGCCAATTGGTATGGAGATAGCAGAAAAGTGCAGGGGTGTTCCACTAGCAATCAGAACGGTGGGAGGCCTATTACAGGGTAAAAGTGAAAAAAAGGAATGGATTACTGTTTTACAAGGTGACTTTTGGAAATTATGTGAAGATGAAGAAAGCATCATGCCAGTGTTGAAAATAAGTTACCAAAACTTGTCGCCTCAACTAAGACAATGTTTTTCTTGTTGCTCTTTATATCCCAAGGATTGGCAAATTGAGAAGAATGAATTGATACAACTGTGGATGGCACAAGGTTATCTTGAATTTTCAGATGAAAAGCAGGCCATGGAAGATATTGGTGACCAATTCATAAATATTTTCTTTATGAAGTCATTTTTCCAAGATGCTCGGTTTGATGGTGATGATAAATTATGTCGCTTTAAAATGCATGACTTAATGCATGATATTGCAATGCAAGTAGCCGGCAATGATTGTTGTTATTTGGATAGTGAGACAAAAAGACTTGTAGGATGTCCCATGCATGTAATGTTGGAAAGTGATGCTATTGGTTTGTTAGAGTCCGTGGATGCAAGTAGGGTGCGGACTTTAATTTTCAACAACAGCTTTTTAGGGAATGGGAGTGAGAAAGAATTGGTTCTTATTTCCAAATTCAAATACCTACGCTTTTTGAAGTTGTTGAATTGTTCTATAATTAAGTTGTGTGATTTAATTGGAAATTTGAAGCATTTAAGATTTCTTAAGTTACAACACTGTGAAGGAGTAGAAGGCATTTTCAAATCTATAAGTAGCATTGTTTGTCTTCAAACATTTATATTGACTGGGAGTCAAGTATTTGAATTTTCTATAAAAGATTTCTTAAGTGTAATCAATTTGAGATATCTTTATATTGAAAATTTAAAAGTGTTTCAAGAGAAGAAGAAGACAACACGTGGATTTGGAAAATTAAGCCTAGGGGAGCGGTATAAGTGCTTAACTTTTTCCAAGTGGCTTTCTTCACTCACAAACATTGTTTATGTGTCTCTTTATTACTGTAAAGGAGTGCACTATCTTTCACCCATGGAACGTCTTCCGTTCCTAAAGTCCCTAATTATAGGTGGCCTTGATGAATTGGAGTACATATATTTTGAAGAACCCTTTTTGTCTGAAGAATTCTTCGCTTCTATGGAGAACCTCGAAATTATTAATTGTGTAAATCTAAAGGGATGGAGGAGGATAAGGGATGATATCATTTATGATGATAACTCTTCACAATCATGTCATCTCTCCTTTTTGCCTTGTCTTTCTTCTTTAACTATCATTCAATGTCCAATGTTGACTCACATGCCTACTTTTCCAAACCTCGACAAGAAATTGGTTTTCTGGGATTGTAATATGGACCCATTGGAAGCAACATTGAACACGGTAAAATCCAATTCTTCGATTGTATTCCCTCCACTCTCCATGCTCGAACACTTGGAACTTAGCGTACCTGAGCTGGATGTTAAATCATTCCCAGATAATTGGATGCAAAATCTAACTTCTCTCAAGCATCTTAAATTTTACAATCTTGGATATCAAGCATTTCAAGAAATTGAATTTTGGTTTAAGGACAGACTCAACTATCTTCCTTCCCTCCAAAAGATTGTAATTTTTGATTGTTGGCTACGTGAATTTCCAGTTTGGATTTGCAACCTATCTTCACTTCAACATGTCTCCATTCGGTCCTGTAGTTTGTTAACTTCACTGCCCGATGAAATGCGTCGCCTTGCCAACTTACAAACCCTAGAAATCATTTATTGCCCCAGTTTAATTGAAGAATGCCAGACAGAAACAAGTGCAACATGGGCCAATATTGCTCACATCCCAAACATATTCTTATATTCTTACTAA 2925 0.3648 MAEQVPYGVAESLINRLASAAFREFGRIYGVMDELERLKNTVELIKAVLLDAEDKQQQNHAIQIWIRRLKDGVLHPTDDLLDEFLIHDLKHKTDESHNNTMTKVLHSLSPSKIAFRGRMARGIEKIQKKFNDIVKDMTALNLNPNVVGAEQSCNEKRETSSFVLESDIVGREDDKNNIINLLRQPRSNQNVFVVAIVGIGGLGKTALAQLVYNDAEVKDIFEKRMWLCVSDNFDVKTILKKMLESLTKGNIDDMLSLEELQNMLHDNLTGKKYLLVLDDIWNESFEKWAQLRTYLMCGAQDSKVVVTTRSKIVAQTMGVSVPYTLNGLNPIESWSLLKKIITFGDENKGVNQILEPIGMEIAEKCRGVPLAIRTVGGLLQGKSEKKEWITVLQGDFWKLCEDEESIMPVLKISYQNLSPQLRQCFSCCSLYPKDWQIEKNELIQLWMAQGYLEFSDEKQAMEDIGDQFINIFFMKSFFQDARFDGDDKLCRFKMHDLMHDIAMQVAGNDCCYLDSETKRLVGCPMHVMLESDAIGLLESVDASRVRTLIFNNSFLGNGSEKELVLISKFKYLRFLKLLNCSIIKLCDLIGNLKHLRFLKLQHCEGVEGIFKSISSIVCLQTFILTGSQVFEFSIKDFLSVINLRYLYIENLKVFQEKKKTTRGFGKLSLGERYKCLTFSKWLSSLTNIVYVSLYYCKGVHYLSPMERLPFLKSLIIGGLDELEYIYFEEPFLSEEFFASMENLEIINCVNLKGWRRIRDDIIYDDNSSQSCHLSFLPCLSSLTIIQCPMLTHMPTFPNLDKKLVFWDCNMDPLEATLNTVKSNSSIVFPPLSMLEHLELSVPELDVKSFPDNWMQNLTSLKHLKFYNLGYQAFQEIEFWFKDRLNYLPSLQKIVIFDCWLREFPVWICNLSSLQHVSIRSCSLLTSLPDEMRRLANLQTLEIIYCPSLIEECQTETSATWANIAHIPNIFLYSY 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03594 974 SUPERFAMILY L domain-like 493 952 - -
Vivi7g03594 974 FunFam Probable disease resistance protein At1g61300 150 322 - -
Vivi7g03594 974 Gene3D Ribonuclease Inhibitor 535 805 IPR032675 -
Vivi7g03594 974 Pfam NB-ARC domain 171 416 IPR002182 GO:0043531
Vivi7g03594 974 PANTHER DISEASE RESISTANCE PROTEIN RP 35 865 IPR044974 GO:0006952
Vivi7g03594 974 Gene3D - 414 505 IPR036388 -
Vivi7g03594 974 Pfam Rx N-terminal domain 10 97 IPR041118 -
Vivi7g03594 974 Gene3D - 10 129 - -
Vivi7g03594 974 Gene3D - 149 321 IPR027417 -
Vivi7g03594 974 Coils Coil 35 55 - -
Vivi7g03594 974 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 428 IPR027417 -
Vivi7g03594 974 Gene3D Ribonuclease Inhibitor 806 960 IPR032675 -
Vivi7g03594 974 FunFam Probable disease resistance protein At1g63360 414 504 - -
Vivi7g03594 974 Gene3D - 328 413 IPR042197 -
Vivi7g03594 974 PRINTS Disease resistance protein signature 193 208 - -
Vivi7g03594 974 PRINTS Disease resistance protein signature 267 281 - -
Vivi7g03594 974 PRINTS Disease resistance protein signature 932 948 - -
Vivi7g03594 974 PRINTS Disease resistance protein signature 365 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03594 Vivi-Chr7 101634640 101638363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03594 190 530 WRKY Transcription Factor Family AT5G45050 23.647 6.67e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03594 - - tpra:123883200 1242.64