Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03592 ATGGCTGAGCAAATTGTATCTGGTTTTGCCGAAAACCTCATTAACAGGTTGGCTTCTGCTGCTTTTCGTGAATTTGGAAGGATTTACGGTGTTCTGGATGAATTGGAAAGTCTTAGAAAAACTGTTGACTCCATTAAAGCTGAGATCCTTGATGCCGAGGATAAGCAACAACAAAATCGTGCCATACAGATCTGGATAAGAAGACTCAAAGATGATGTGCTCCACCCTGCAGATGATCTGCTAGATGAATTTTTTATTCAAGATATGAGACACAAAATTGATGAATCTCATAAGAACAAACTGACACAGGTACTTCATTCCTTCTTTCCAAATAAGATTTGTTTTCGCAGTAGAATGGCTCATAAGATTGAAAAAATACAAAAGAAATTTAATGATGTTAAGAAAGATATGATTGAGTTGAATCTAAATCGAAAGGTTGTGGTGGTTGAACATAGTAACAATGTAAAGAGGGATACTAGTTCATATGTGATAGAATCAGATATCATTGGAAGAGAAGATGATAAAAACAAGATTATAAGCTTGTTGAGGAAACCACATGGAAATCAAAATGTCTCTGTGGTTGCTATTGTTGGGATTGGTGGTTTGGGGAAGACAGCTCTTGCTCAGTTGGTATACAATGATGCTGAAGTAAAAGATGTTTTTGAAAAACGTATGTGGGTATGTGTCTCTGATAACTTTGATGTCAAAACTATTCTTAAGAAAATATTGGAGTCATTAACCTATAGCAAAGACTATGATAAGTTATCACTGGAAGAGTTGCAAAATATGCTTCGTGACAATTTAACGGGTGAGAAATACTTGTTAGTCCTAGATGACATTTGGAACGAGAGTTTTGAAAAATGGGCTCAGTTGAGGACTTACTTGATGTGTGGTGCTCAAGGCAGTAAGGTTGTTGTGACAACTCGTAGCAAAATTGTAGCACAAACAATGGGTGTAAGTGTCCCTTATACTCTGAATGGTTTGAATCCAATAGAATCTTGGAGTTTGTTGAAGAAAATTATCACATTTGGGGATGAGAATAAAGGAGTGAATCAAAATCTTGAGCCGATTGGAATGAAGATAGCAGAAAAGTGCAGGGGTGTTCCACTAGCAATCAGAACGTTGGGAGGTCTATTACAGGGTAAAAGTGAAAAAAAGGAATGGATTACTGTTTTACAAGGTGACTTTTGGAAATTATGTGAAGATGAAGAAAGCATCATGCCAGTGTTGAAAATAAGTTACCAAAACTTGTCGCCTCAACTAAGACAATGTTTTTCTTGTTGCTCTTTATATCCCAAGGATTGGGAAATTGAGAAGGATGAATTGATACAACTATGGATTGCACAAGGTTATCTTGAATTTTCAAATGAAAAGCAGGCCATGGAAGATATTGGTGACCAATTCATCAATATTTTCTTGATGAAGTCATTTTTCCAAGATGCTCAGTTTGTTGGTGATAAATTATATTGCTTTAAAATGCATGACTTAATACATGATATTGCAATGCAAGTAACAGGTAATGATTGTTGTTACTTGGATAGTGAGACAAAAAGACTTGTAGGATGTCCCATGCATGTAATGTTGGAAAGTGATTCTATTGGTTTGTTAGAGTCCGTGGATGCAAGTAGGGTGCGGACTTTAATTTTCCACAACAGCTTTTTAAGGAATGGGAATGAGAAAGAATTGGTTCTTATTTCCAAATTCAAATACCTACGCTTTTTGAAGTTGTTGAATTGTTCTATAATTAAGTTGTGTGATTTAATTGGAAATTTGAAGCATTTAAGATTTCTTAAGTTACAACACTGTGAAGGAGTAGAAGGCATTTTCAAATCTATAAGTAGCATTGTTTGTCTTCAAACATTTATATTTACTGGGAGTCAAGTATTTGAATTTTCTATAAAAGATTTCTTAAGTGTAATCAATTTGAGATATCTTTATATTGATAATTTAAATGCGTTTCAAGAGAAGAAGAGAACGTGTGGATTTGGAAAATTAAGCCTATGGGAGCGGTATAAGTGTTTAACTTTTTCCAAGTGGCTTTCTTCACTCACAAACATTGTTTATGTGTTTCTTTATAACTGCAAAGGTGTGCACTTTCTTTCACCCATGGAACGTCTTCCGTTTCTAAAGTCCCTAATTATAGGCGGCCTTGATGAATTGGAGTACATATATTTTGAAGAACCTCATTTGTCCGAAGAATTCTTCCCTTCTTTGGAAAACCTCGAAATTGTTAGTTGTAAAAATCTGAAGGGATGGAGGAGGATAAGGGATGGTATCATTTATGATGATAACTCTTCTCAATCATGTGATCTCTCCTTTTTTCCTTGTCTTTCTTCCTTAACTATCGTTGATTGTCCATTGTTGACTCACATGCCTACTTTTCCAAACCTCGACAAGAAATTGGTTTGCAGGAATTCTAATATGGACCCATTGGAAGAAACAGTAAACATGGTAAAATCAAATTCTTCGATTGTATTCCCTCCACTCTCCATGCTCGAACACCTGGAACTTAGCGGACGTGAGCTGGATGTTAAAACACTCCCAGATACTTGGATGCAAAATCTAACTTCTCTCAAGCATCTTACATTTTACAATCTTCGAAATCAAGCATTTCAAGAAATTGAATTTTGGTTTAAGGACAGACTCAACTATCTTCCTTCCCTGCAAAAGATTGTAATTTTTGATTGTTCTCTAGAAGCATTTCCATTTTGGATTTGCAACCTTTCTTCACTTCAATATGTCTCCATTCTGTTCTGTCCATGTTTAGCTTCATTGCCCAATGGAATGCGTCGCCTTGCCAACTTACAAACCCTAGAGATCACTCATTGCCCCAGTTTAATTGAAGAATGCCAGACAGAAACAAGTGCAACATGGGCCAATATTGCTCACATCCCAACCATAATCTTAGAGTGA 2913 0.3598 MAEQIVSGFAENLINRLASAAFREFGRIYGVLDELESLRKTVDSIKAEILDAEDKQQQNRAIQIWIRRLKDDVLHPADDLLDEFFIQDMRHKIDESHKNKLTQVLHSFFPNKICFRSRMAHKIEKIQKKFNDVKKDMIELNLNRKVVVVEHSNNVKRDTSSYVIESDIIGREDDKNKIISLLRKPHGNQNVSVVAIVGIGGLGKTALAQLVYNDAEVKDVFEKRMWVCVSDNFDVKTILKKILESLTYSKDYDKLSLEELQNMLRDNLTGEKYLLVLDDIWNESFEKWAQLRTYLMCGAQGSKVVVTTRSKIVAQTMGVSVPYTLNGLNPIESWSLLKKIITFGDENKGVNQNLEPIGMKIAEKCRGVPLAIRTLGGLLQGKSEKKEWITVLQGDFWKLCEDEESIMPVLKISYQNLSPQLRQCFSCCSLYPKDWEIEKDELIQLWIAQGYLEFSNEKQAMEDIGDQFINIFLMKSFFQDAQFVGDKLYCFKMHDLIHDIAMQVTGNDCCYLDSETKRLVGCPMHVMLESDSIGLLESVDASRVRTLIFHNSFLRNGNEKELVLISKFKYLRFLKLLNCSIIKLCDLIGNLKHLRFLKLQHCEGVEGIFKSISSIVCLQTFIFTGSQVFEFSIKDFLSVINLRYLYIDNLNAFQEKKRTCGFGKLSLWERYKCLTFSKWLSSLTNIVYVFLYNCKGVHFLSPMERLPFLKSLIIGGLDELEYIYFEEPHLSEEFFPSLENLEIVSCKNLKGWRRIRDGIIYDDNSSQSCDLSFFPCLSSLTIVDCPLLTHMPTFPNLDKKLVCRNSNMDPLEETVNMVKSNSSIVFPPLSMLEHLELSGRELDVKTLPDTWMQNLTSLKHLTFYNLRNQAFQEIEFWFKDRLNYLPSLQKIVIFDCSLEAFPFWICNLSSLQYVSILFCPCLASLPNGMRRLANLQTLEITHCPSLIEECQTETSATWANIAHIPTIILE 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03592 970 Gene3D - 414 504 IPR036388 -
Vivi7g03592 970 SUPERFAMILY L domain-like 492 792 - -
Vivi7g03592 970 Gene3D - 11 131 - -
Vivi7g03592 970 SUPERFAMILY RNI-like 727 948 - -
Vivi7g03592 970 FunFam Probable disease resistance protein At1g63360 414 503 - -
Vivi7g03592 970 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 428 IPR027417 -
Vivi7g03592 970 Coils Coil 123 143 - -
Vivi7g03592 970 Gene3D Ribonuclease Inhibitor 529 798 IPR032675 -
Vivi7g03592 970 Gene3D Ribonuclease Inhibitor 799 958 IPR032675 -
Vivi7g03592 970 Gene3D - 151 321 IPR027417 -
Vivi7g03592 970 FunFam Probable disease resistance protein At1g61300 149 322 - -
Vivi7g03592 970 PANTHER DISEASE RESISTANCE PROTEIN RP 34 861 IPR044974 GO:0006952
Vivi7g03592 970 Coils Coil 35 55 - -
Vivi7g03592 970 Pfam NB-ARC domain 171 416 IPR002182 GO:0043531
Vivi7g03592 970 Pfam Rx N-terminal domain 11 98 IPR041118 -
Vivi7g03592 970 Gene3D - 328 413 IPR042197 -
Vivi7g03592 970 PRINTS Disease resistance protein signature 365 379 - -
Vivi7g03592 970 PRINTS Disease resistance protein signature 930 946 - -
Vivi7g03592 970 PRINTS Disease resistance protein signature 267 281 - -
Vivi7g03592 970 PRINTS Disease resistance protein signature 193 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03592 Vivi-Chr7 101619689 101623702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03592 190 529 WRKY Transcription Factor Family AT5G45050 24.930 1.30e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03592 - - tpra:123883200 1240.71