Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03572 ATGAAAAAAACAGGTAGCAGTGTGTATTTGGTGTTACTTGCTGTTCACATAGTGGTGACAAATTCAGCGCCAGAAAGTGCCATTGTGACACAAATTCCAGGTTTCAGTGGAACAATACCTTCCAAGAATTATGCTGGCTATGTAACTTTGGATGAAAAAAACTTGTATTACTATTTTGTTGAGTCACAAGGTCAACCTTCTCAGGATCCTGTTGTTCTTTGGCTCAATGGTGGACCTGGTGGCTCTAGCTTTGATGGCTTCGTCTATGAACATGGTCCTTTCAATTTTGAAGCAGCAAAGACTAAGGGAAACCTGCCAACTCTGCATCTCAATCCATACAGCTGGACCAAGGTTTCTAGTATTATATATTTGGAATCTCCGGTTGGCGTTGGCTTTTCTTATTCTAACAATGAAACTGATTATGTAACCGGAGACATAAAGAATGCGTTAGATTCACATGCCTTTCTCCTTAAGTGGTTTGAACTATATCCCGAGTTCCTTTCCAATCCTTTCTTCATTGCTGGAGAGTCATATGCCGGAGTTTATGTGCCTACTATTGCCTATGAAGTAGTGAAAGGAATTGATGCGGATGTGAAGCCCAGACTGAATTTTAAGGGTTACATGGTTGGAAATGGTGTTACGGATGAACAAATTGATGGCAATGCTCTTGTTCCATTTGTACATGGGATGGGCTTTATTACAGATGAATTGTTTGAGGAGGCTAACCGCGAGTGTGATGGGAATTTCTATAATCCGATCGGTGAAAATTGTACAAAGAAGCTTGCAAAAATTGATGAGGACATTGCTGGTTTGAACATGTATAACATTCTAGAACCATGCTATCATGGCACAGAGACAGACAAGGTTATCACTACTTATGCTAAGCTTCCGTCTAGTTTCCGGAAGTTAGGTGAGACTGAGAAACCTCATCTTGTGAGGAAAAGAATGTTCGGTCGTGCTTGGCCCCTAAGAGCCCCTGTCAGAGACGGAATCTTACCTTCTTGGTCGAAACTTACCAATAGCATCCATGTTCCATGTTTAGATCTCAGCGTTGCAGACGTTTGGTTGAACAATGAAGAAGTCAGGAAAGCAATTCACACTACAGAGAAAAGTGTGGTCAGTCGTTGGGAATTTGTTTCGGACATAATTTCCTACGATCATGATGCCGGAAGCATGATTAAGTACCACAAGAACCTAACTTCCAGAGGATACCGAGCTCTTATATTCAGCGGTGATCATGACATGTGTGTTCCATATACGGGGACTCACGCATGGACGAGATCAATGGGATACAAGATTGTTGATGAATGGAGGCCTTGGTTAGTCAATGGTCAAGTTGCTGGGTATACTCAAGGATATGACAACAATCTTACTTTTCTGACCATAAAGGGAGCTGGGCATACTGTTCCAGAATATAAGCCACAAGAAGCATTGGAATTTTACAAACGTTTTCTTGCTGGATTGCCAATATGA 1473 0.4162 MKKTGSSVYLVLLAVHIVVTNSAPESAIVTQIPGFSGTIPSKNYAGYVTLDEKNLYYYFVESQGQPSQDPVVLWLNGGPGGSSFDGFVYEHGPFNFEAAKTKGNLPTLHLNPYSWTKVSSIIYLESPVGVGFSYSNNETDYVTGDIKNALDSHAFLLKWFELYPEFLSNPFFIAGESYAGVYVPTIAYEVVKGIDADVKPRLNFKGYMVGNGVTDEQIDGNALVPFVHGMGFITDELFEEANRECDGNFYNPIGENCTKKLAKIDEDIAGLNMYNILEPCYHGTETDKVITTYAKLPSSFRKLGETEKPHLVRKRMFGRAWPLRAPVRDGILPSWSKLTNSIHVPCLDLSVADVWLNNEEVRKAIHTTEKSVVSRWEFVSDIISYDHDAGSMIKYHKNLTSRGYRALIFSGDHDMCVPYTGTHAWTRSMGYKIVDEWRPWLVNGQVAGYTQGYDNNLTFLTIKGAGHTVPEYKPQEALEFYKRFLAGLPI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03572 490 FunFam Carboxypeptidase 22 303 - -
Vivi7g03572 490 SUPERFAMILY alpha/beta-Hydrolases 29 489 IPR029058 -
Vivi7g03572 490 Gene3D - 342 489 - -
Vivi7g03572 490 FunFam Carboxypeptidase 392 487 - -
Vivi7g03572 490 Gene3D alpha/beta hydrolase 21 314 IPR029058 -
Vivi7g03572 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Vivi7g03572 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Vivi7g03572 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 457 470 IPR001563 GO:0004185|GO:0006508
Vivi7g03572 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Vivi7g03572 490 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Vivi7g03572 490 FunFam Carboxypeptidase 345 489 - -
Vivi7g03572 490 ProSitePatterns Serine carboxypeptidases, histidine active site. 457 474 IPR033124 GO:0004185
Vivi7g03572 490 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 474 IPR001563 GO:0004185|GO:0006508
Vivi7g03572 490 Pfam Serine carboxypeptidase 33 486 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03572 Vivi-Chr7 101387516 101390312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03572 349 490 Calmodulin-binding Proteins AT2G22960 47.183 3.79e-42 146