Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03557 ATGTCGCAGAAACCTCCACCTACCAAGTTATCACAAATCCAATTAGACGAGGACCGCAAGGACTGTTTGTGGGGCTCTTTTTGTGTAACTATCTTGTTACTTTTCGGTATTTGGCTATATTTTTCGCTTTTCTCGGAAGACTCGCAGCCCTATAAACCAGTGGAGTTCAGTATAGCAGATGCCTCAATCACGCAGTTTAATCTCACGAGCGACAACACCTTATACTATAATTTTAAGTTCAATATATCTGTGAGAAACTCAAACTACGACCGTTACGGGTTCGAAATCACTGCGATTTCTTCCTATAAAGGTAACAAATTTGCTACGGTGGATATGGATTATTTTGTCTTAGATTCTAAGAAGACTATTTTGCTTAAGCCTGTGGTGTTTTACGGGAACAATTTGATCAACCTCAATACTCAACAACATATGGAGTATGATAATGAGACACTATTGAAAAAATTTAATTTAGATTTGAAATTAAATTTGAAACACAACGAATATGTTTATTGTATAGGTTTGAGAGTTCCTTTGATTTCTAATAAAAAATTAGAATCTAGTTTCAATGTTACCGAATGCTCTCGCGAATACCAGGGATGGGGTTAG 606 0.363 MSQKPPPTKLSQIQLDEDRKDCLWGSFCVTILLLFGIWLYFSLFSEDSQPYKPVEFSIADASITQFNLTSDNTLYYNFKFNISVRNSNYDRYGFEITAISSYKGNKFATVDMDYFVLDSKKTILLKPVVFYGNNLINLNTQQHMEYDNETLLKKFNLDLKLNLKHNEYVYCIGLRVPLISNKKLESSFNVTECSREYQGWG 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03557 201 PANTHER OS05G0367900 PROTEIN 23 165 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03557 Vivi-Chr7 101209858 101210463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03557 54 163 SNARE and Associated Proteins AT1G32270 33.621 6.22e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03557 - - vvo:131619854 348.977