Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03556 ATGGCTTCCTCTTTGCTTCTCTTTCTCCTCTGTCCACTGATATTTCAATCCAACTCTGTAGTAGCTCAAACCAAAAGCACCATAGCCATTGGTGATTCTTATACTGCAGAAACAAATATCTCTCCATGGTTGCTTTCACCTTCTGGGGACTTTGCCTTTGGTTTTCTTCCACTTAATAAAACTGATCTGTTTTTGCTTTCCATTTGGTATGCCAAAATTTCTGAGAAAACTGTTGTGTGGCATGCTAATGGAGACAGTCCTGCTCCAAAAGGGTCAAAAGTGGAACTCAATGCCAATGATGGGTTGGTTCTAACTTCTCCAAATGGTGACAGGTTATGGAATACTACTCAGGTACTCAGTGGTAGAGTTTCTCGCGGTGTGTTCAATGACACTGGCAACTTTGTGCTTCAGGACAGTGATTTCAACAGTGTGTGGGAAACTTTCGACTTTCCTAGGGACACCTTGTTGCCGTCTCAAGTTCTTGATAAAGGTGGAAAGCTTCGTTCAAAGCTTAAGGAGACGGACTTCAGGAAGGGAAGGTTTGAGCTCCATTTACAAAATGATGGTGATCTTGTTATGTATTCTATTAATTTACCATCTGATTATGCTAATGATAACTACTATGAAAGTCAAACTGTTGGGTCCAATACATCAAGTGCTGGAACTCAATTGGTCCTTGACAGATCAGGGGACTTGTATGTCTTAAGAGAGAACAATGAGAAATTCAACATGTCAGGAAGAAATGGAGAAGAAGATGTCTCGATAAAAGTCTCCAGCACTAATTTTTATCTTAGAGCAACTCTTAATTTGGATGGAGTGTTTTCACTTTTCAAGCATCCAAAGAATTCAACTGGTAGTGAAGGTTGGACTACAGTGTGGTCTCATCCTGAAAATATATGTCGATATACTATATCTGCTGGTAGTGGCGTTTGTGGATATAATAGCTTCTGCACATTGGGAGATGATAAGAGACCAACATGTCAGTGTCCCAAAAGTTACTCACTGATTGATCCTGATGATCCATATGGTAGCTGCAAGCCGGACTTCATACAAGGATGTGCAGAAGACGCACTAAGTACAAAAAGAAATGATCTCTATTACTTTGAGAATTTGACTGAAACTGATTGGCCCCTATCGGATGCTGCACTTCTAAAGCCTTTTACAGAGGAACTATGTATGAAAGCTTGTATGGAAGATTGCTTGTGTTCTGTGGCTATTTTCAGGTCAGGTGATAGTTGTTGGAAGAAGAAGTTACCACTCTCAAATGGGAGAGTTGATACCACACTCGATGGTGCCAAGGCCTTCTTGAAAGTGAGGAAAGATAAAACCTCCTTTGATTTTTCTCCAAATCCAATCGATGGGAACAAGAATAATAAGGAAACTTTGGTTTTGATTGTTTCTGTTCTTTTTGGTAGCTCTGCTATTCTCAATGGTTTATTGGTTGTAATGATATGTGCCGGCACCTCCATTTTTCAGTACAAGAAGAAGCCTAGAAGAGTCAGTAAAAGTGATACTTGCGTTGAAACCAATTTACGTTGCTTCACTTACGAAGAGCTTGAGGAAGCTACTAATGGATTTGACAAAGAGCTAGGAAGGGGAGCTTTTGGTATTGTTTATGAAGGAGTCATCAACAATAACACAAGTTCTGAAACTCGCGTGGCAGTGAAAAAGTTGAACAACTTTTTGTTGGATCAGGCTCATAAGGAATTTAGAAACGAAGTGAATGGCATTGGTCTCACTCATCACAAGAATTTGGTTCGTTTACTAGGATTTTGTGAGGGTGGATCTGAAAGATTGTTGGTTTATGAGTACATGAGCAATGGCACTTTGGCAAATTTTCTTTTCAATGGTGATGATGAGAAACAAAAACCAAGTTGGAAACTAAGACTTGAAATTGCAATAGGGGTAGCTAGAGGACTTGTGTATTTACATGAAGAGTGCATTACTAGGATCATCCATTGTGACATAAAGCCTCAAAACATACTCCTTGATGACAACTTCAATGCAAGAATTTCAGACTTTGGGTTAGCCAAGCTGTTGAACATGAATGAGAGCAAAACCAATACTGGCATAAGGGGAACAAAAGGGTATGTTGCGCTTGAGTGGTTCAAAAACATGACTATCACAGCTAAGGTGGATGTGTATAGTTATGGAGTAGTGCTACTTGAGATAATTTCATGTAGAAGATGCGTTCAAGAAATGGAACAGGAAGATGAAGAGAAAGCAATACTAACTGACTGGGCTTATGATTGCCACAAGGATGGTGTTGTAGATGCATTGGTTGAGGGTGACAGTGAGGCATTGGATGACAAAGAAAAATTGGAGAAATTGGTAATGATTGGTCTTTGGTGTGTTCAAGAGGATCCATATCTTAGACCAACCATGAGAACTGTGGTACATATGCTTGAGGGTATTGTTGAAGTGCAAGTTCCACCATACCCCTCACAAATTAGTATTCAATATTCTCTAAATTAG 2475 0.3972 MASSLLLFLLCPLIFQSNSVVAQTKSTIAIGDSYTAETNISPWLLSPSGDFAFGFLPLNKTDLFLLSIWYAKISEKTVVWHANGDSPAPKGSKVELNANDGLVLTSPNGDRLWNTTQVLSGRVSRGVFNDTGNFVLQDSDFNSVWETFDFPRDTLLPSQVLDKGGKLRSKLKETDFRKGRFELHLQNDGDLVMYSINLPSDYANDNYYESQTVGSNTSSAGTQLVLDRSGDLYVLRENNEKFNMSGRNGEEDVSIKVSSTNFYLRATLNLDGVFSLFKHPKNSTGSEGWTTVWSHPENICRYTISAGSGVCGYNSFCTLGDDKRPTCQCPKSYSLIDPDDPYGSCKPDFIQGCAEDALSTKRNDLYYFENLTETDWPLSDAALLKPFTEELCMKACMEDCLCSVAIFRSGDSCWKKKLPLSNGRVDTTLDGAKAFLKVRKDKTSFDFSPNPIDGNKNNKETLVLIVSVLFGSSAILNGLLVVMICAGTSIFQYKKKPRRVSKSDTCVETNLRCFTYEELEEATNGFDKELGRGAFGIVYEGVINNNTSSETRVAVKKLNNFLLDQAHKEFRNEVNGIGLTHHKNLVRLLGFCEGGSERLLVYEYMSNGTLANFLFNGDDEKQKPSWKLRLEIAIGVARGLVYLHEECITRIIHCDIKPQNILLDDNFNARISDFGLAKLLNMNESKTNTGIRGTKGYVALEWFKNMTITAKVDVYSYGVVLLEIISCRRCVQEMEQEDEEKAILTDWAYDCHKDGVVDALVEGDSEALDDKEKLEKLVMIGLWCVQEDPYLRPTMRTVVHMLEGIVEVQVPPYPSQISIQYSLN 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03556 824 CDD B_lectin 44 151 IPR001480 -
Vivi7g03556 824 Pfam Protein tyrosine and serine/threonine kinase 526 802 IPR001245 GO:0004672|GO:0006468
Vivi7g03556 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 210 IPR036426 -
Vivi7g03556 824 Gene3D - 19 148 IPR036426 -
Vivi7g03556 824 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 605 810 - -
Vivi7g03556 824 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 22 149 - -
Vivi7g03556 824 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 814 - -
Vivi7g03556 824 Gene3D - 152 306 - -
Vivi7g03556 824 Gene3D Transferase(Phosphotransferase) domain 1 605 809 - -
Vivi7g03556 824 ProSiteProfiles Protein kinase domain profile. 524 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03556 824 Gene3D Phosphorylase Kinase; domain 1 497 604 - -
Vivi7g03556 824 SUPERFAMILY Protein kinase-like (PK-like) 506 815 IPR011009 -
Vivi7g03556 824 ProSitePatterns Protein kinases ATP-binding region signature. 530 557 IPR017441 GO:0005524
Vivi7g03556 824 SMART blect_4 33 151 IPR001480 -
Vivi7g03556 824 ProSiteProfiles Bulb-type lectin domain profile. 19 149 IPR001480 -
Vivi7g03556 824 CDD STKc_IRAK 530 805 - -
Vivi7g03556 824 PIRSF SRK 1 823 IPR024171 GO:0004674
Vivi7g03556 824 Pfam D-mannose binding lectin 77 161 IPR001480 -
Vivi7g03556 824 FunFam S-receptor-like serine/threonine-protein kinase 493 604 - -
Vivi7g03556 824 FunFam Serine/threonine-protein kinase 152 303 - -
Vivi7g03556 824 Pfam S-locus glycoprotein domain 240 333 IPR000858 GO:0048544
Vivi7g03556 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Vivi7g03556 824 SMART serkin_6 524 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03556 Vivi-Chr7 101194644 101197514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03556 510 814 Receptor kinase-like Gene Family AT1G60800 40.062 9.84e-71 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi7g03556 PK_Tyr_Ser-Thr 3.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03556 - - vra:106773297 1115.91