Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03547 ATGAAAAAGATGAAAAATACAGGTGGCAGTGTCTGTGTGGTGTTACTTCACATTTATCTGAGCATTGTGGTGACAAATTCAGCACCAGAAAGTGCCATTGTAACGCAGATTCCAGGCTTCAATGGAACAATACCTTCCAAGCATTATGCTGGATATGTAACTGTGGATGAAAGTCATGGAAGGAATTTGTATTACTATTTTGTTGAGTCAGAAGGGAAACCTTCTCAGGATCCTGTTGTTCTCTGGCTTAATGGTGGACCTGGTTGCTCTAGCTTTGATGGTTTCGTATATGAACATGGTCCTTTCAATTTTGAAGCAGCAAAGACTAAGGGAAGCCTGCCAACTTTGCATCTCAATCCATACAGCTGGACCAAGGTTTCAAGTATCATATATTTGGACTCTCCAGCTGGTGTTGGATTTTCATACTCTAAGAATGAAACTGATTATGTAACCGGTGACACAAAGACTGCGACCGATTCACATGCCTTCCTCCTTAAGTGGTTTGAACTATATCCCGAGTTCCTTTGCAATCCTTTCTTCATTGCTGGAGAGTCATATGCTGGAGTTTATGTTCCTACTCTTGCCTATGAAGTAATGAAAGGAATTGATGCTGCAGTGAAGCCGAAACTGAATTTTAAGGGTTACATTGTTGGAAATGGTGTTACGGATGAACAAATTGATGGCAATGCTCTTGTTCCATTTGTACATGGGATGGGTCTTATCCCAGATGAATTGTTTGAGGAGGCTAATCGTGAGTGTAACGGGAATTTCTATAATTCGGTCAGTGATAATTGTACAAACAAGCTTGCGAAAATTGATGAGGACATTGCTGGGTTGAACATATATAACATTTTAGAACCATGCTATCATGGCACTGAGGCAGACAAGATTATCACTACTTATGCTAATTTGCCGTCTAGTTTCCGGAAGTTAGGCGAAACTGAGAAACCTCATCTTGTGAGGAAGAGAATCTTCGGCCGTGCTTGGCCCCTAAGAGCACCTGTCAGAGACGGAATCGTACCCACTTGGCCGCAACTTACCAGTAGCGACAATGTTCCATGCACAGACGGCACTGTTGCAGACGCATGGTTGAACAATGAAGAAGTCAGGAAGGCAATTCACACTGCAGAGAAAAGTGTGGTCAGTAGTTGGGATTTATGCACAGACCAAATTTCCTTCGATCATGACGCTGGAAGCATGATTAAGTATCACAAGAACCTAACTTCCAAAGGATACCGAGCTCTTATATTCAGTGGTGATCATGACATGTGTGTTCCATATACTGGAAGTCAAGCATGGACGAGATCAATCGGATACAAGATTGTTGATGAATGGAGGCCTTGGTTATTCAATGGTCAAGTTGCTGGCTTTACTCAAGGATATGACAAGAATCTTACTTTTCTGACCATAAAGGGAGCTGGGCATACTGTTCCAGAATACAAGCCACAAGAAGCATTGGAATTTTACAAACGTTTTCTCGCTGGATCGTCAATATAA 1497 0.4195 MKKMKNTGGSVCVVLLHIYLSIVVTNSAPESAIVTQIPGFNGTIPSKHYAGYVTVDESHGRNLYYYFVESEGKPSQDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKTKGSLPTLHLNPYSWTKVSSIIYLDSPAGVGFSYSKNETDYVTGDTKTATDSHAFLLKWFELYPEFLCNPFFIAGESYAGVYVPTLAYEVMKGIDAAVKPKLNFKGYIVGNGVTDEQIDGNALVPFVHGMGLIPDELFEEANRECNGNFYNSVSDNCTNKLAKIDEDIAGLNIYNILEPCYHGTEADKIITTYANLPSSFRKLGETEKPHLVRKRIFGRAWPLRAPVRDGIVPTWPQLTSSDNVPCTDGTVADAWLNNEEVRKAIHTAEKSVVSSWDLCTDQISFDHDAGSMIKYHKNLTSKGYRALIFSGDHDMCVPYTGSQAWTRSIGYKIVDEWRPWLFNGQVAGFTQGYDKNLTFLTIKGAGHTVPEYKPQEALEFYKRFLAGSSI 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03547 498 SUPERFAMILY alpha/beta-Hydrolases 34 496 IPR029058 -
Vivi7g03547 498 ProSitePatterns Serine carboxypeptidases, histidine active site. 465 482 IPR033124 GO:0004185
Vivi7g03547 498 FunFam Carboxypeptidase 27 311 - -
Vivi7g03547 498 Gene3D alpha/beta hydrolase 26 322 IPR029058 -
Vivi7g03547 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 465 478 IPR001563 GO:0004185|GO:0006508
Vivi7g03547 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Vivi7g03547 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Vivi7g03547 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Vivi7g03547 498 FunFam Carboxypeptidase 353 497 - -
Vivi7g03547 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 482 IPR001563 GO:0004185|GO:0006508
Vivi7g03547 498 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Vivi7g03547 498 FunFam Carboxypeptidase 400 495 - -
Vivi7g03547 498 Pfam Serine carboxypeptidase 38 494 IPR001563 GO:0004185|GO:0006508
Vivi7g03547 498 Gene3D - 351 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03547 Vivi-Chr7 101164495 101168006 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03547 359 498 Calmodulin-binding Proteins AT2G22960 45.000 2.77e-40 142