Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03500 ATGAAGATGATGGTTATTCTGAGTAGCTGGATTTTCAGTTATCATGTTTTTGTTAGTTTCTTGTTGCTGATTAGTTCTGGTATAAGCTATGGGACTGAAACTGATATCTTCTGTTTGAAAGCTATAAAAAATTCTATCAAAGATCCGAATAATTATTTGACATCTTCGTGGAATTTCAACAATAAAACCGAAGGGTTTATCTGTAGATTCAATGGTGTTGAGTGTTGGCATCCTGATGAGAATAGAGTCTTGAATCTTAAGTTATCGAATATGGGACTCAAGGGTCAGTTTCCACGCGGCATTGTTAATTGTTCGAGCTTAACAGGATTAGATCTTTCGGTCAACGATCTCTCTGGAAACATTCCCGTAGATATATCTTCGCTTCTAACCTACGTGACGTCTCTTGATCTATCTTCAAATGCGTTTTCTGGAGAGATACCTCTTAGTCTTGCGAATTGTACTTATCTGAATTCCCTTAAACTTGATCAGAACCAACTTACCGGTCAAATTCCTCTGCAACTAGGCACTCTCACACGCATTAAGACTTTTGATGTATCCGACAATTCTTTGACCGGGCAAGTTCCAACTTTCACTGACGGTAAAGTTACCCCAAATTATGCAAATAATCAAGGTCTTTGTGGACCTCCTTTATTGGGTGTTTGCAAGGCCAAGGAATCCTCCAAGAGTAATACTGCGGTTATAGCGGGAGCCGCTGTTGGTGCGGTGACTCTTGCAATGTTAGGATTGGGTGTTGTAATGTTCTTCTTTGTGCGCCGTGGTTCTTATAGAAGAAAGGAAGAAGATCCTGAAGGAAACAAATGGGCAAGAAGTATTAAAGGAACCAAAGGAATTAAGGTGTCTCTATTTGAGAAATCGATTTCGAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGACGGGAAGAACGGGAACCGTTTACAAAGCTACTCTTGAAGACGGCACAGCATTTATGGTGAAAAGATTGCAGGAATCTCAACACTCCGAGAAAGAATTTATGTCCGAGATGGCGACACTTGGGATTGTCAAACATCGTAATCTGGTTCCTCTTTTAGGTTTTTGTATGGCCAAAAAAGAGAGGCTTTTGGTCTATACAGACATGCCGAACGGAATGCTTCATGATCAGCTACATCCTGCTGAAGGTGAGTGCACTCTCGACTGGCCTTTGCGACTCAAAATCGCAATCGGAGCGGCCAAAGGATTTGCATGGCTTCATCATAGCTGCAATCCTCGTATCATCCACCGAAACATAAGCTCGAAGTGCATCTTGTTGGACGCGGAATTCGAGCCCAAAATTTCCGATTTCGGCCTTGCCAGATTGATGAACCCTCTCGATACACATTTGAGTACTTTCGTAAACGGTGAATTCGGCGATTTCGGTTACGTGGCTCCTGAGTATACAAAAACTTTAGTCGCCACACCTAAGGGCGACGTGTTCAGCTTCGGGACCGTGCTTCTCGAGTTGGTAACCGGCGAAAAACCAGCAAGTGTGGCTAAAGCGCCAGAAACTTTCAAAGGAAATCTCGTAGAATGGATTGCTGAGCTTACAACAAACTCCAAACTCCACGATGCCATTGACGAAAAGCTTGTTAACAAAGGCGATGATAACGAGCTTTTCCAATTTCTAAAGGTTGCATGCAACTGCGTTTCAGAAACTCCAAAGGAGAGGCCAACCATGTTTGAAGTGTATCAGTTCTTAAGAGCTATTGGTAGTAAGTACAATTTCACAACTGAGGATGAAATATTGATACCTGAAGATATTGGTATTGATAACATGGATGAACTTATTGTTGCTAGAGAAGGAAATAATTGA 1860 0.4156 MKMMVILSSWIFSYHVFVSFLLLISSGISYGTETDIFCLKAIKNSIKDPNNYLTSSWNFNNKTEGFICRFNGVECWHPDENRVLNLKLSNMGLKGQFPRGIVNCSSLTGLDLSVNDLSGNIPVDISSLLTYVTSLDLSSNAFSGEIPLSLANCTYLNSLKLDQNQLTGQIPLQLGTLTRIKTFDVSDNSLTGQVPTFTDGKVTPNYANNQGLCGPPLLGVCKAKESSKSNTAVIAGAAVGAVTLAMLGLGVVMFFFVRRGSYRRKEEDPEGNKWARSIKGTKGIKVSLFEKSISKMKLSDLMKATNNFSNTNIIGTGRTGTVYKATLEDGTAFMVKRLQESQHSEKEFMSEMATLGIVKHRNLVPLLGFCMAKKERLLVYTDMPNGMLHDQLHPAEGECTLDWPLRLKIAIGAAKGFAWLHHSCNPRIIHRNISSKCILLDAEFEPKISDFGLARLMNPLDTHLSTFVNGEFGDFGYVAPEYTKTLVATPKGDVFSFGTVLLELVTGEKPASVAKAPETFKGNLVEWIAELTTNSKLHDAIDEKLVNKGDDNELFQFLKVACNCVSETPKERPTMFEVYQFLRAIGSKYNFTTEDEILIPEDIGIDNMDELIVAREGNN 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03500 619 Pfam Leucine rich repeat N-terminal domain 34 76 IPR013210 -
Vivi7g03500 619 Gene3D Transferase(Phosphotransferase) domain 1 383 600 - -
Vivi7g03500 619 FunFam Nuclear pore complex protein NUP107 32 196 - -
Vivi7g03500 619 Gene3D Ribonuclease Inhibitor 33 223 IPR032675 -
Vivi7g03500 619 FunFam Leucine-rich repeat receptor-like protein kinase 383 593 - -
Vivi7g03500 619 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 84 584 - -
Vivi7g03500 619 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 269 382 - -
Vivi7g03500 619 Pfam Protein tyrosine and serine/threonine kinase 311 582 IPR001245 GO:0004672|GO:0006468
Vivi7g03500 619 SUPERFAMILY Protein kinase-like (PK-like) 286 582 IPR011009 -
Vivi7g03500 619 ProSiteProfiles Protein kinase domain profile. 308 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03500 619 Gene3D Phosphorylase Kinase; domain 1 269 381 - -
Vivi7g03500 619 SUPERFAMILY L domain-like 32 197 - -
Vivi7g03500 619 CDD STKc_IRAK 314 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03500 Vivi-Chr7 100662109 100664841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03500 17 596 Receptor kinase-like Gene Family AT3G28450 46.246 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Vivi7g03500 PK_Tyr_Ser-Thr 2.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03500 - - psat:127076602 1135.94