Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03462 ATGGCGTCCGAAAACCCGAAATCAGAGACCGCGCTAGAGAATTCAAAAGTAGAGGCAATAACCAAAGCTGTAGATTCTCTTCTGAAATGGCACAAATCACGATCAGAAACCGAAAAACCCAAACTCTTCGAAGAAGAAGACTTCATCTACCTCGTCTTAACCCTAAAGAAGATTCCCACTAACGGCCGCGTTAACCCTCACAAGATCCCCATCCCTCACTCCCTCCTCTCGCCGTCATCGGAGCAATGTCTCATCATCGACGATCGTGCCAACAAGCCCGCTCGACTCACCAAAGATGAGGCTAAGAAGAAGATTCAGTCTGAGTCCATTCCTATTTCCAAGATTCTCAAGCTCTCGAAGCTCACCACGGATTATCGCCCGTTTGAGGCCAAGCGTAAGCTGTGTAATTCGTATGATTTGTTTTTTGCTGATAAGACTGTTGTGCCGTTGTTGCCGAGGTTGCTTGGGAAGCAGTTTTTTAAGAAGAGGAAGGTTCCGGTGCAGCTTGATTTGAAGAAGAAGAACTGGAAGGAGCAGATTGACAGGGCGTTATCTTCGGCGCTGCTGTTTTTGAGGACTGGGACTTGTAGTGTTTTGAAGGTGGCCAAGATGAGTATGGAGAGGGATGAGATTGTGGAGAATTTGGCTGCGGCGATGGAGGGGGTTGTTGAGGTTTTTCCTAAGAAATGGGGGGTTGTTAGGTCTTTTCATGTTAAGTTGTTGGAGTCAGTTGCGTTGCCGGTTTATCAGGTGGTGCCGGATGTTAGGTTGAAGATTGAGGGGGTTAAGGATTTGGAGGCTGCGCTGGTGAAGGATGAGAAGAAGGTTCGTGATGGGAAGGATGGGAAGAAGAGTAAGAAGGGGAGGATTCATGAGATTGAGTATATGGATGATAGAATGAGTGAGGAGGGTGATGTTCGTAGTGATGTTGATGTTGCTGATATTGATGTTGATGATGATGCTGTTGGTGGTGGTGATAAGGTAGATGATGATCACGAGAACAGTGAGATTGAGAGTGGAGGGATTAGGATTAAGAAGAGGAAGAAAGGAGTCAAAGGGAAGAAAGAGGTTTTGAGTGAGGCGGGAAGTGTGAAATCGTTGAAGGGATCTGCTAAGAGGAAGAAGAAAGATGTGTTAGAGACTGTGAATGTGAATGGAAATGCTGCAGAAGAAGTTTCCGTCAAGAAGGGCAAAGATAAATTGTTCACCGAGGACACTGGTTCGGACAAGAAGACAAAGAGAGCTGATGTGAAGTTAGCCAAGGGTAGGAAAAGTAAGAAAGTTGTATGA 1290 0.4597 MASENPKSETALENSKVEAITKAVDSLLKWHKSRSETEKPKLFEEEDFIYLVLTLKKIPTNGRVNPHKIPIPHSLLSPSSEQCLIIDDRANKPARLTKDEAKKKIQSESIPISKILKLSKLTTDYRPFEAKRKLCNSYDLFFADKTVVPLLPRLLGKQFFKKRKVPVQLDLKKKNWKEQIDRALSSALLFLRTGTCSVLKVAKMSMERDEIVENLAAAMEGVVEVFPKKWGVVRSFHVKLLESVALPVYQVVPDVRLKIEGVKDLEAALVKDEKKVRDGKDGKKSKKGRIHEIEYMDDRMSEEGDVRSDVDVADIDVDDDAVGGGDKVDDDHENSEIESGGIRIKKRKKGVKGKKEVLSEAGSVKSLKGSAKRKKKDVLETVNVNGNAAEEVSVKKGKDKLFTEDTGSDKKTKRADVKLAKGRKSKKVV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03462 429 MobiDBLite consensus disorder prediction 395 416 - -
Vivi7g03462 429 SUPERFAMILY Ribosomal protein L1 21 249 IPR023674 -
Vivi7g03462 429 MobiDBLite consensus disorder prediction 345 376 - -
Vivi7g03462 429 Pfam Ribosomal protein L1p/L10e family 39 244 IPR028364 -
Vivi7g03462 429 Gene3D - 92 186 IPR016095 -
Vivi7g03462 429 MobiDBLite consensus disorder prediction 395 429 - -
Vivi7g03462 429 CDD Ribosomal_L1 20 248 IPR028364 -
Vivi7g03462 429 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 22 243 - -
Vivi7g03462 429 FunFam Ribosomal protein L1p/L10e family 94 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03462 Vivi-Chr7 100339012 100340733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03462 137 239 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 26.214 5.60e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03462 K14775 - gmx:100782862 404.445