Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03447 ATGGCTTTGGAGAATTTGTTCAACATATTGTTATCTGTTGAAACAAAGTTTAGAAGTTTTTCATGGCAGCCATTACTCTCACCATGCTTATTGGAACATGTAACTTTACCTCTAGAGTTTGGATTCTTTGTGATATTGTTAGTCCAACTTTTAAGAAATTGGATGAACAATGTCACCAAGCAAAACAAGCTCTCAGAAGTGAATCCAAACGCCATGAAATTCGGTTTCGCTTACAAAATCGGCTTATTTTGCACCGCGTTATTGTTTGCTGTTCATGGCTTAATGCTGTTTTTGATCATCAATCATGGTGAGCCGGAGTGTACCTCGAAGCTTCAAGCTTTAACATCGGAGATAGCTCAAGTGTTATCGTATGCAATTGTTGTGATCGCGATATGTAAGATGTTGAAAAAGCCGAACGCTTATTTCCCTTGGATTGTAAGAGCTTGGTGGTTTATCGGTTTCTTTTCGAGCATTATCAGCACGATTCTTCATGTTCATTTCAGCGTAAAAAACAACGGTACTATCGGTGTAACGGAATACGCAGATTTTCTTGGTTTGGTTTCCTCAACATGTCTTTTAGTTATTTCGACAAGAGGCAAAACAGGCATGGTTATCATTGCGACAAAAAATGGAAGTCTAGATGAACCACTATTGGGAGAGAAAAACGAGAAACATTCTTCCGAGTTTGTAAGAGAATCGTCGCCATACGGAAAAGCTACACTTCTTCAGTTGATAACTTTCTCATGGCTCAATCCATTGTTTGCAGTAGGGTATAAGAAGCCTCTTCAATTGAATGACATTCCTGATCTCGACATTAAGGACTCTGCTGAATATCTGAATTGCTCGTTTGACGAGAGTCTTCGACAAGTTAAGGAGAAAGATGGAACTACGAATCCGTCTATCTACAAGGCAATTTATTTATTTGCTAGAAAGAAAGCAGCGATCAACGCGTTTTTCGCGATAATATGTGCTTCCGCGTCTTATGTTGGTCCATATTTGATTACTGATTTTGTGAATTTTCTCGCCGAGAAGGATATCCGTGGAGTAAAGAGCGGATACCTTTTGTCGTTAGGTTTCTTATGTGCTAAAATGGTTGAGACCATAGCTCAAAGGCAATGGATTTTCGGTGCTCGGCAGTTAGGTCTTCGATTAAGAGCAGGGTTGATAGCGCATATATACAAGAAGGGCTTACATCTGTCTAGCCGATCGCGTCAAAGTCATTCCGGTGGTGAGATAATGAACTACATGAGTGTTGATGTGCAGAGAATTACCGATTTCGTTTGGTACGTAAATGTGATATGGATGCTTCCGATTCAAATTTCCTTAGCCGTTTTCATTTTGCAAACAAATCTTGGATTAGGTTCGTTGGCTGCATTAGCCGCGACGCTAGCGGTTATGGCTTTGAACATACCGCTAATGAAAATACAGAAAAGATACCAATCAAAGATCATGGATGCAAAAGACAACAGAATGAAAACCACTTCAGAAATTCTCAAAAACATGAGGACTTTGAAACTTCAAGCATGGGATAGTGAATTTTTCCAAAGGATAGCGTCGTTGAGAAGTGTCGAATATAGTTGGCTATTGAAGTCGTTAAGACAACAAGCGTTTAGCGCGTTTATCTTCTGGGGTTCACCTACATTCATTTCAGTGATAACCTTTTGGACATGTATGTTCTTAGGGATTGAACTAACAGCTGGAAGAGTCTTATCGGCATTCGCGACGTTTCGAATGTTACAGGATCCTATCTTTAGTCTACCTGATTTACTCAATGTCATCGCCCAAGGAAAAGTTTCTGTCGATAGGATCGCTTCGTTTCTTAAGAAGGAAGAAATCCAACACGATGCGATCGAATACGTCGCAAAGGACAAAACAGAATTTGATGTTGTTGTTGAGAAAGGAAGATTCAGTTGGGATCCCGAGTCAACAATTCCAACACTCGATGAAATCGAGTTGAAAGTTAAGAGAGGAACAAAGGTTGCGATTTGCGGTTCTGTCGGTTCAGGGAAATCTAGCGTGCTATCGGGAATTCTGGGAGAGGTATATAAACAATCGGGGAATGTTAAGATTAGTGGAACAAAAGCTTATGTTCCACAATCTGCATGGATACTTACTGGAAATATAAGGGATAATATAACCTTTGGAAAAGAGTTCAATGAAGATAAGTACGAGAAAACCGTTGAAGCATGCGCGTTGAAGAAGGACTTTGAGCTATTTTCATGTGGAGATTTGACTGAGATTGGTGAGAGAGGGATTAATATGAGTGGTGGACAGAAACAAAGAATACAGATTGCTAGAGCAGTTTATCAAGATGCTGATATATACCTTTTTGATGATCCTTTCAGTGCCGTTGATGCGCATACCGGCACTCACCTATTTCAGGAATGTCTTATGGGGATTCTCAAAGAGAAAACTATACTTTTTGTTACACACCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATTCTGGTAATGCAAAATGGAAGGATTGCACAAGCTGGAACATTTGAAGAACTTCTAAAGCAAAATATAGGATTTGAAGTATTAGTTGGTGCTCATAGCAAAGCACTAGAGTCAGTTCTTATGGTTGAAAACTCAAATAAAACAAATTTAAATCCAATACCTGAAGGAGAATCCATCACCTACTCACACTCAAGTTCTGAACTTTTGCACACAAAGCTCGACACAGTGCAAGATAACCCACCTGATAACAAAGGAAATAAGGATGGAAAATTGGTTCAAGAAGAAGAACGAGAAACAGGAAGCATATCAAGAGAAGTTTATTGGTCTTATTTGACCACTGTTAAAGGAGGACTTCTTGTTCCAATCATAATATTGGCACAGTCGTCGTTCCAAATTCTTCAGATTGCTAGTAACTATTGGATGGCTTGGGTTTGTCCCACAAAATCTGATGCTAAGCCAATATATGATATGAACTTCATATTACTTATTTATATGGTACTATCTGTTGCTGGTGCCTTTTGTGTTCTTCTGAGAGCCATGTTGGTGTTAAATGTCGGACTTTGGACAGCACAAAGTTTTTTCACAAGAATGTTGCATAATGTGCAAAGAGCACCCATGTCCTTTTTCGATTCTACGCCAACTGGAAGAATCTTGAACAGGGCCTCAACAGATCAAAGTGTGCTAGATTTGGAAATGGCAAACCGAGTAGGATGGTGTGCTTTCTCGATAATACAGATTCTAGGAACGATTGCGGTGATGTGTCAGGCAGCATGGCAAGTGTTTATCATCTTCATTCCAGTAACTGCAATCTGCATATGGTATCAAAGATATTATAATCCGACGGCAAGAGAGCTGGCTCGGTTAGCACAGATACAGATTACTCCAATTCTACACCATTTCTCAGAATCTTTAGCAGGAGCTGCATCAATACGAGCTTTCGATCAAGAAGGCCGTTTCATGAGCTCAAATCTTGTCCTTTTGGATGGCTTCTCAAGGCCATGGTTTCATAATGTGTCTGCAATGGAATGGCTTTCTTTCAGATTAAACTTGCTTTCAAATTTTGTTTTCGCCTTTTCACTTGTCTTGCTAGTGAGCCTCCCTGAAGGGTTCATCAATCCAAGCATTGCAGGGTTGGCAGTAACATATGGAATCAATCTAAATGTCTTGCAAGCTTCCGTTATATGGAATATTTGTAATGCAGAAAACAAGATGATATCAGTTGAAAGAATTCTTCAATATACAAATATAACGAGTGAATCGCCTCTTGTGATTGAAAACTGCCGGCCGCCAAGAAACTGGCCAGAAACTGGAACAATATCTTTCCTAAATTTGCAGATACGTTATGCTGAACATCTCCCATCTGTGCTGAAAAATATCACTTGTACATTTCCTGGAAGGAAGAAAATTGGAGTCGTAGGACGAACCGGCAGTGGGAAATCAACACTCATACAAGCAATTTTCAGGGTTGTTGAACCAAGAGAGGGATGCATTATGATTGACAATGTAGACATATGTGAGATAGGTCTCCATGACTTAAGGTCAAGGCTGAGCATTATCCCTCAAGATCCGGCCTTGTTTGAAGGCACGGTTAGAGGAAACCTGGATCCTCTTGAGCAATACTCTGACATTGAAGTCTGGGAGGCTCTAGATAAATGTCAGCTAGGTCACCTAGTGAGAGCCATGGAAGAGAAGTTGGACTCCCCAGTGGTTGAAAATGGTGATAACTGGAGTGCTGGACAAAGGCAGTTATTTTGCCTTGGAAGAGCCTTATTGAAGAAAAGCAGCATATTAGTACTAGATGAAGCAACAGCCTCAGTGGATTCTGCAACTGATGGAGTGATACAGGATATCATCTGTCAAGAGTTCAACAATCGAACAGTTGTCACAATAGCTCATCGAATTCACACAGTTATTGATAGCGACTTGGTTTTGGTTCTCAGTGATGGGAGAATTGCGGAATATGATGAACCATCGAAGTTACTTGAAAGAGAAGATTCCTTCTTCTACAAACTTATAAAGGAATACTCTAGCAGATCACATAGCTTCAACAACTTGGCAACTCAACATGTCCAAAACAAGGAGTAA 4548 0.4013 MALENLFNILLSVETKFRSFSWQPLLSPCLLEHVTLPLEFGFFVILLVQLLRNWMNNVTKQNKLSEVNPNAMKFGFAYKIGLFCTALLFAVHGLMLFLIINHGEPECTSKLQALTSEIAQVLSYAIVVIAICKMLKKPNAYFPWIVRAWWFIGFFSSIISTILHVHFSVKNNGTIGVTEYADFLGLVSSTCLLVISTRGKTGMVIIATKNGSLDEPLLGEKNEKHSSEFVRESSPYGKATLLQLITFSWLNPLFAVGYKKPLQLNDIPDLDIKDSAEYLNCSFDESLRQVKEKDGTTNPSIYKAIYLFARKKAAINAFFAIICASASYVGPYLITDFVNFLAEKDIRGVKSGYLLSLGFLCAKMVETIAQRQWIFGARQLGLRLRAGLIAHIYKKGLHLSSRSRQSHSGGEIMNYMSVDVQRITDFVWYVNVIWMLPIQISLAVFILQTNLGLGSLAALAATLAVMALNIPLMKIQKRYQSKIMDAKDNRMKTTSEILKNMRTLKLQAWDSEFFQRIASLRSVEYSWLLKSLRQQAFSAFIFWGSPTFISVITFWTCMFLGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLKKEEIQHDAIEYVAKDKTEFDVVVEKGRFSWDPESTIPTLDEIELKVKRGTKVAICGSVGSGKSSVLSGILGEVYKQSGNVKISGTKAYVPQSAWILTGNIRDNITFGKEFNEDKYEKTVEACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLFDDPFSAVDAHTGTHLFQECLMGILKEKTILFVTHQVEFLPAADLILVMQNGRIAQAGTFEELLKQNIGFEVLVGAHSKALESVLMVENSNKTNLNPIPEGESITYSHSSSELLHTKLDTVQDNPPDNKGNKDGKLVQEEERETGSISREVYWSYLTTVKGGLLVPIIILAQSSFQILQIASNYWMAWVCPTKSDAKPIYDMNFILLIYMVLSVAGAFCVLLRAMLVLNVGLWTAQSFFTRMLHNVQRAPMSFFDSTPTGRILNRASTDQSVLDLEMANRVGWCAFSIIQILGTIAVMCQAAWQVFIIFIPVTAICIWYQRYYNPTARELARLAQIQITPILHHFSESLAGAASIRAFDQEGRFMSSNLVLLDGFSRPWFHNVSAMEWLSFRLNLLSNFVFAFSLVLLVSLPEGFINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYTNITSESPLVIENCRPPRNWPETGTISFLNLQIRYAEHLPSVLKNITCTFPGRKKIGVVGRTGSGKSTLIQAIFRVVEPREGCIMIDNVDICEIGLHDLRSRLSIIPQDPALFEGTVRGNLDPLEQYSDIEVWEALDKCQLGHLVRAMEEKLDSPVVENGDNWSAGQRQLFCLGRALLKKSSILVLDEATASVDSATDGVIQDIICQEFNNRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDEPSKLLEREDSFFYKLIKEYSSRSHSFNNLATQHVQNKE 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03447 1515 CDD ABC_6TM_ABCC_D1 315 603 IPR044746 GO:0140359
Vivi7g03447 1515 CDD ABC_6TM_ABCC_D2 941 1235 IPR044726 GO:0140359
Vivi7g03447 1515 Gene3D - 1243 1496 IPR027417 -
Vivi7g03447 1515 FunFam ABC transporter C family member 5 904 1241 - -
Vivi7g03447 1515 MobiDBLite consensus disorder prediction 902 918 - -
Vivi7g03447 1515 FunFam ABC transporter C family member 10 297 611 - -
Vivi7g03447 1515 ProSitePatterns ABC transporters family signature. 754 768 IPR017871 GO:0005524|GO:0016887
Vivi7g03447 1515 Pfam ABC transporter 1277 1425 IPR003439 GO:0005524
Vivi7g03447 1515 Gene3D ABC transporter type 1, transmembrane domain 285 612 IPR036640 GO:0005524|GO:0016020
Vivi7g03447 1515 Gene3D ABC transporter type 1, transmembrane domain 903 1241 IPR036640 GO:0005524|GO:0016020
Vivi7g03447 1515 Pfam ABC transporter transmembrane region 945 1187 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g03447 1515 Pfam ABC transporter transmembrane region 315 579 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g03447 1515 SMART AAA_5 1286 1478 IPR003593 GO:0016887
Vivi7g03447 1515 SMART AAA_5 656 829 IPR003593 GO:0016887
Vivi7g03447 1515 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 238 1498 - -
Vivi7g03447 1515 Gene3D - 627 858 IPR027417 -
Vivi7g03447 1515 CDD ABCC_MRP_domain1 629 829 - -
Vivi7g03447 1515 SUPERFAMILY ABC transporter transmembrane region 310 611 IPR036640 GO:0005524|GO:0016020
Vivi7g03447 1515 CDD ABCC_MRP_domain2 1258 1478 - -
Vivi7g03447 1515 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 625 852 IPR003439 GO:0005524
Vivi7g03447 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1252 1492 IPR027417 -
Vivi7g03447 1515 Pfam ABC transporter 647 781 IPR003439 GO:0005524
Vivi7g03447 1515 FunFam ABC transporter C family member 3 1243 1495 - -
Vivi7g03447 1515 SUPERFAMILY ABC transporter transmembrane region 928 1240 IPR036640 GO:0005524|GO:0016020
Vivi7g03447 1515 MobiDBLite consensus disorder prediction 894 918 - -
Vivi7g03447 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 624 845 IPR027417 -
Vivi7g03447 1515 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1223 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g03447 1515 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1260 1494 IPR003439 GO:0005524
Vivi7g03447 1515 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 314 595 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g03447 1515 FunFam ABC transporter C family member 5 614 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03447 Vivi-Chr7 100183687 100193230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03447 609 881 Calmodulin-binding Proteins AT2G36910 29.452 8.29e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03447 - - gmx:100817486 2444.46