Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03407 ATGGCTTCCACATTTCTCACCTTACCAACTCCTTTCCTTCACAAATCAACCGCCGCTTCTTTCTCCAACTCAAAACTCTCACTTTTGAAGAGGAACTCTTTGAAGATTAACGCAATTTCCAAGCAATGGGAACCAACTAAGGTTGTGCCTCAGGCTGATAGGGTTCTTATTCGTCTCGAGGAACTATCACAAACAACCGCTGGTGGAATTTTGTTGCCAAAGTCAGCTGTTAAATTTGAGCGATATCTCACCGGCGAAGTCCTAAGTGTTGGTGCCGAGGCTGAAAATGTAAAGGCCGGTGCCAAGGTACTATTCAATGACGTAAGTGCTTATGAGGTGGATTTGGGAACTGAGGCGAAGCACTGCTTCTGTAAATCAAGTGACTTGTTGGCCGTGGTTGAGTAG 405 0.4543 MASTFLTLPTPFLHKSTAASFSNSKLSLLKRNSLKINAISKQWEPTKVVPQADRVLIRLEELSQTTAGGILLPKSAVKFERYLTGEVLSVGAEAENVKAGAKVLFNDVSAYEVDLGTEAKHCFCKSSDLLAVVE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03407 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi7g03407 134 Gene3D GroES chaperonin 43 134 IPR037124 GO:0006457
Vivi7g03407 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 46 132 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi7g03407 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi7g03407 134 Pfam Chaperonin 10 Kd subunit 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi7g03407 134 PRINTS 10kDa chaperonin signature 98 110 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi7g03407 134 PRINTS 10kDa chaperonin signature 72 93 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi7g03407 134 PRINTS 10kDa chaperonin signature 120 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi7g03407 134 PRINTS 10kDa chaperonin signature 48 63 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vivi7g03407 134 FunFam 10 kDa chaperonin 43 134 - -
Vivi7g03407 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03407 Vivi-Chr7 99632103 99635623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03407 1 134 Calmodulin-binding Proteins AT5G20720 27.564 1.83e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03407 K04078 - gmx:100500567 206.838