Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03405 ATGGATACAGTTACACCACCGTCAGTTACACCTCCGTCACTTCACCGTTCTTCTCCGTTACAGAATATCAGTCCCAGCATTCTCATTATCGTTACGATTCTCGCCATCACAGTTATCGTTTCCGTTGCTATCTTTTTCCTTCTCCGCCACCTCAACTGCAACCGTCTCCGCCGTGTCGCCTCCGATCGATATCCTACCACATACACTGTATCGCATCCAAGCCACTGGATCTCTCCGGAGCTACGTCCTTCAGTCATTGACGCCTTGCCGCTGTTCCCGTACTCCTCAGTATCTCGCCGATCTTCCACTGTCACCGCCGCTGACTGCGCCGTATGCTTATCGAAGTTCCGAAACAGCGACCTCCTCCGTTCTCTACCTCTCTGTTTGCACGCATTCCATGCTGAATGTATAGACACGTGGCTCAGTTCGAATCTATCCTGTCCGCTCTGTCGCTCTTCCATTTTTACTTCCGATTCCGACCTCAACAAGATTCTCCGATCAACTTCCTCCGATAGTTTTCCTATTGAAATAGGAAATATAAGCCGGCGAAGACCGGAATCCGTCTCCGTCTCCGTCATCGAAATAGATACAAATGCGGAATCCGTCGGCGACGGAAGATCGTACTCCATTGGATCATTTGAGTATTATGTAGAGGAGCCATCGGAAGTTCTTTTCACTCAAGATCACCGGAGAAGTATCTCCGATCAGAAAGATATTCACATTCCAGTACTCCCTGCGAATCCTCCAATATCACATGAAACGTTAGAGACCGTCACTGGAAATACCGGAAGTGGATACTGGCTGAAGGAGTACATGGACAGGCTTTCGGCTTCTATATCATCGCGAACGGCGTCGTTTCGTAGCTCCGGTAGGTTCTTCGGTGGTGGCGGAAGTAGTCGGAGAATTGAGCCGGTGGATTATGACGTGGAAGGTAACAGAATTGGTGAAGAGATTACCGAAATGTTTAGTTGGCTTTCGTCAGGGGTATGA 990 0.4909 MDTVTPPSVTPPSLHRSSPLQNISPSILIIVTILAITVIVSVAIFFLLRHLNCNRLRRVASDRYPTTYTVSHPSHWISPELRPSVIDALPLFPYSSVSRRSSTVTAADCAVCLSKFRNSDLLRSLPLCLHAFHAECIDTWLSSNLSCPLCRSSIFTSDSDLNKILRSTSSDSFPIEIGNISRRRPESVSVSVIEIDTNAESVGDGRSYSIGSFEYYVEEPSEVLFTQDHRRSISDQKDIHIPVLPANPPISHETLETVTGNTGSGYWLKEYMDRLSASISSRTASFRSSGRFFGGGGSSRRIEPVDYDVEGNRIGEEITEMFSWLSSGV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03405 329 CDD RING-H2_EL5-like 108 151 - -
Vivi7g03405 329 FunFam E3 ubiquitin-protein ligase ATL6 71 157 - -
Vivi7g03405 329 SMART ring_2 109 150 IPR001841 -
Vivi7g03405 329 Pfam Ring finger domain 108 151 IPR001841 -
Vivi7g03405 329 SUPERFAMILY RING/U-box 87 157 - -
Vivi7g03405 329 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Vivi7g03405 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 156 IPR013083 -
Vivi7g03405 329 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 18 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03405 Vivi-Chr7 99613121 99614493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03405 2 240 C3H Transcription Factor Family AT2G20030 30.522 6.89e-22 93.6