Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03400 ATGGAAAATGTATGGGAAACGTGGCTTTCTTCTTTGGAAATGGATGATCGCTCATTGGATGAAGACAAGTTTGCTATAGAGAATGTGCAACAACCAAGTTTCTCTTTTGAGGATTTTAATAATGCCAAGTCTTCAATTCATGACAACTTGATCAAGAATAGTAATAGCTCAAATTCTCTCATTTCTTCACAACAAACACCATCTCAATACCTTCTCTCTTTTGAAAACTCATCTTTGGAACCTTCTCCTAATAACATCATGGACCCTAAAACAATAACATTGAATAACAATGAGAGTGGTGAGTTACCAAAAGTAATTAAGAAAACAAACAAGAATCGTAGAAGTTCATCTGGGAGACAAGATCATATCATGGCTGAGAGAAAAAGAAGACAAGTTATTGGTGAGAGGTTCATAGCACTTTCTGCCACCATTCCTGGATTGAAGAAGACAGATAAAATGTACATACTTGAACAAGCTATCAATTATGTGAAGCAACTTCAAGAGAAAGTAAAAGAGCTGGATAATGAAAACAAAATGAAAAACAAATATTCAGAAATATTGATAAAAGAATCTCAAGCTTGCAAAAAAAAGGATGATATTGATGAGGATAAATATTACTCCAATAAAGAACTACCTAAAGTTAAAGCAAGAGTGATAGATAAGGAAATTATGATTGGAATCCATTGTGAGAAACAAGAGAATATTGTGGTGAAAATAATGGGTTTGCTTCAAAATCTTCATCTATCACTTGCTAGTAGTAGCATATTACCATTTGGAAATTCCACTCTTAAAGTTACAATCATTGCTAAGATGAATGATAAGTACTGCATGAACGTGACTGATCTAGTTGAAAACCTGAGGCATTATCTCTCAGAATTACCAGACAATCAGAATAACATTTGTTGA 906 0.3333 MENVWETWLSSLEMDDRSLDEDKFAIENVQQPSFSFEDFNNAKSSIHDNLIKNSNSSNSLISSQQTPSQYLLSFENSSLEPSPNNIMDPKTITLNNNESGELPKVIKKTNKNRRSSSGRQDHIMAERKRRQVIGERFIALSATIPGLKKTDKMYILEQAINYVKQLQEKVKELDNENKMKNKYSEILIKESQACKKKDDIDEDKYYSNKELPKVKARVIDKEIMIGIHCEKQENIVVKIMGLLQNLHLSLASSSILPFGNSTLKVTIIAKMNDKYCMNVTDLVENLRHYLSELPDNQNNIC 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03400 301 Pfam Helix-loop-helix DNA-binding domain 119 167 IPR011598 GO:0046983
Vivi7g03400 301 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 117 184 IPR036638 GO:0046983
Vivi7g03400 301 Gene3D - 107 182 IPR036638 GO:0046983
Vivi7g03400 301 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 117 166 IPR011598 GO:0046983
Vivi7g03400 301 Coils Coil 156 183 - -
Vivi7g03400 301 SMART finulus 123 172 IPR011598 GO:0046983
Vivi7g03400 301 PANTHER BHLH TRANSCRIPTION FACTOR 14 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03400 Vivi-Chr7 99580889 99590088 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03400 64 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 40.637 7.29e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi7g03400 HLH 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03400 - - psat:127076671 423.705