Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03393 ATGAGCTATCAAATGGAAGAATTGCAAGAGAATTGGATTCCTCATTTGGAAATGGATGGTGATAATTTCTTCAATCAACAAAACCATATGAAATATTTGCAGGAACAAATCTCATACCCTTCTTCTACTCTTGTTGAAGCTGCTTATAATAATAACACAAATTTTGAGAACCCTCTTGATGTTTTCATGGGAGATAGAACATGTCAATTCAACATGGTTGATATTCATGAAGATGCTGCAGAAAATAATATTCTATCCACTCACATTATGCCTTTGATTAATTCACCAATTGATCCTGCTTTTCAAAGTGCTCATCAAGTGAATCATGGTTTGAAGCCTATTAAGAGGAAGATTAGAACCACTTCTGAGACTGCTGAGCATATAGCTTCTGAGAGAAAAAGAAGATTAAAATTGACCAGGAATTTCATTGCACTTTCTGCTATAATTCCTGGCTTGAAGAAGACAGAAAAGTCTTACATACTTCAAGAAGCAATCAATTATGTGAATCAACTTCAAGAACGTGTAAGAGAACTTGAAATTGAAAATGAAAAGATAAATATTGCATATTCAACAATGGTTGATAAGAAACTACAAAACTCAACAACTTGTGAAGCAAATGTGGTTGATAATTATATATTCAATGATGAATTTGCACTGCCTGATGTTAGAGCAAGAGTCTCAGAGAAGAATGTGCTGATTTGTATTCAATGTGAGAAGATGCAAAATGATAATATGGTGCACAAAATACTCAGTTTGGTTACAAATCTTCATCTATCTATAACAAGTACCAACATTTTCCCATTTGGAGCTTCCACACTTCAAATCACAATTATTGCTCAGATGAAAGAGGAGTATAGCTTGACAATCAATGATTTGGTGAAAATCCTAAGAAAAGTAATATTGGAGTCAAATGGTGTTTAA 921 0.3322 MSYQMEELQENWIPHLEMDGDNFFNQQNHMKYLQEQISYPSSTLVEAAYNNNTNFENPLDVFMGDRTCQFNMVDIHEDAAENNILSTHIMPLINSPIDPAFQSAHQVNHGLKPIKRKIRTTSETAEHIASERKRRLKLTRNFIALSAIIPGLKKTEKSYILQEAINYVNQLQERVRELEIENEKINIAYSTMVDKKLQNSTTCEANVVDNYIFNDEFALPDVRARVSEKNVLICIQCEKMQNDNMVHKILSLVTNLHLSITSTNIFPFGASTLQITIIAQMKEEYSLTINDLVKILRKVILESNGV 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03393 306 SMART finulus 128 177 IPR011598 GO:0046983
Vivi7g03393 306 Pfam Helix-loop-helix DNA-binding domain 126 172 IPR011598 GO:0046983
Vivi7g03393 306 Coils Coil 161 188 - -
Vivi7g03393 306 Gene3D - 121 195 IPR036638 GO:0046983
Vivi7g03393 306 PANTHER BHLH TRANSCRIPTION FACTOR 8 302 - -
Vivi7g03393 306 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 122 171 IPR011598 GO:0046983
Vivi7g03393 306 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 125 187 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03393 Vivi-Chr7 99528084 99531019 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03393 91 300 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 35.780 1.45e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi7g03393 HLH 9.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03393 - - vvo:131617999 607.831