Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03386 ATGAAGTGCTTTTACTATTTTAAATTTACTCTTAAGGGTAGGGGTCAAAGATCAGCTCCTGAGCTAAAAGAGCAAGAGAAAAGTCAGTTTTCGGGATCTGAAAGAGTTACGAAGTCTTCTTGTTCATCTACCTCTTCACCTAGGGGTATACCGAAACTCTATGAGGAGAAGGGTCATAATTTGAGGGTGTTTTCGCTCTCGGAACTTAAACGTGCAACAAGTGATTTCAATAGGCTTCTTAAGATAGGTGAAGGTGGATTTGGAAGTGTTTTTAAAGGTTCAATTAAGCCTGTTGGTGGAAATGGTGAGAATGTCTTAGTTGCTATCAAAAGACTTAACAAAGATGCATTGCAGGGTCATAAGCAATGGTTGACAGAAGTTCAATTTCTTGGAGTTGTGGAGCATCCAAACCTCGTTAAGCTTATTGGATACTGCGCTTTGGATGGTGAGAGAGGGATCCAACGATTACTCGTGTACGAATACATGCCGAATAGAAGCTTAGAAGCTCATCTTTTCAATAAAGCTTATGATCCTGTGCCTTGGAAAACAAGACTTGAAATTGCACTTGGAGCAGCTCAAGGCTTATCTTATCTCCATGAAGAATTAGAAGTCCAGGTGATATATCGCGATTTTAAATGCTCCAACGTGCTTCTGGATGAAAATTTTAAACCAAAACTTTCTGATTTCGGACTCGCTAGGGAGGGACCGGTAGCCGGGGATACTCATGTTTCAACTGCTGTAATGGGGACACGTGGTTATGCTGCTCCAGATTACATTGAAACAGGACATCTCACGTCCAAGAGTGATGTATGGAGTTTCGGTGTCGTGCTATACGAAATACTCACCGGTAGGCGTTCGTTGGCAAGAAACCGTCCGAAAACAGAACAAAAACTACTAGAATGGGTGAAGAACTATCCACCTGATAGCAAAAAGTTCGACGCGATAATGGATCCAAGACTTGAGGGACAGTATTCAATCAACGCAGCGAGAAAAATCGCCAAGCTCGCAGATCATTGTCTGCGTAAGAGCGCCAAAGATAGGCCGGCAATGAGTCAGGTGGTAGAGAGATTGAAGCAAATAATACAAGACTCCATTGAAGAACAAGAACAAGAAAAAGAACAACACGAACATGAAACTAACGAGATAAACATTGTTGAGGTAGCTGAAAATGAATCAGTTGAGCCGCCTCTAGAAGAGGCGAAATCGTCGGGTTCGACTGAGTTATGGAGAAAGAGAATGGAACATCTTGCAAAACTTGGTGAGCATGTGGAGAGTGTTAGTAGAAAAAGGTTTATGATCCAACAAAGAGCTAATGTTTCTTCTTAG 1326 0.4186 MKCFYYFKFTLKGRGQRSAPELKEQEKSQFSGSERVTKSSCSSTSSPRGIPKLYEEKGHNLRVFSLSELKRATSDFNRLLKIGEGGFGSVFKGSIKPVGGNGENVLVAIKRLNKDALQGHKQWLTEVQFLGVVEHPNLVKLIGYCALDGERGIQRLLVYEYMPNRSLEAHLFNKAYDPVPWKTRLEIALGAAQGLSYLHEELEVQVIYRDFKCSNVLLDENFKPKLSDFGLAREGPVAGDTHVSTAVMGTRGYAAPDYIETGHLTSKSDVWSFGVVLYEILTGRRSLARNRPKTEQKLLEWVKNYPPDSKKFDAIMDPRLEGQYSINAARKIAKLADHCLRKSAKDRPAMSQVVERLKQIIQDSIEEQEQEKEQHEHETNEINIVEVAENESVEPPLEEAKSSGSTELWRKRMEHLAKLGEHVESVSRKRFMIQQRANVSS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03386 441 FunFam PTI1-like tyrosine-protein kinase 3 162 371 - -
Vivi7g03386 441 MobiDBLite consensus disorder prediction 17 31 - -
Vivi7g03386 441 Gene3D Phosphorylase Kinase; domain 1 51 161 - -
Vivi7g03386 441 ProSitePatterns Protein kinases ATP-binding region signature. 82 110 IPR017441 GO:0005524
Vivi7g03386 441 Coils Coil 354 385 - -
Vivi7g03386 441 MobiDBLite consensus disorder prediction 16 49 - -
Vivi7g03386 441 PANTHER OS01G0588500 PROTEIN-RELATED 39 361 - -
Vivi7g03386 441 CDD STKc_IRAK 82 360 - -
Vivi7g03386 441 SUPERFAMILY Protein kinase-like (PK-like) 59 357 IPR011009 -
Vivi7g03386 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Vivi7g03386 441 Pfam Protein tyrosine and serine/threonine kinase 81 357 IPR001245 GO:0004672|GO:0006468
Vivi7g03386 441 Gene3D Transferase(Phosphotransferase) domain 1 162 387 - -
Vivi7g03386 441 MobiDBLite consensus disorder prediction 32 49 - -
Vivi7g03386 441 ProSiteProfiles Protein kinase domain profile. 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03386 Vivi-Chr7 99452304 99454883 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03386 62 357 Glycoside Hydrolase AT3G07070 49.664 1.06e-92 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi7g03386 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03386 - - vvo:131617993 837.025