Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03325 ATGGAGAGGTTTTCAGAGCACAAGGTACTTCCAAGAAACCTGCCTGTTTTGGTTGAGGTTTCGCCGAATATGGGAACTGCGAGAGAGACCGTTCCGAGGATAAATGGCCATGAGATTTCAAATGCCAGGTGGATTTCAGCAAGAGAATTGAGTCAATTGCCGCAGGCGAGAGACGTGCCTATGACACGTTTGGCTTCGATTAGAGAAGTGGCGCAGTTGTCGAATGCACGGATACTATTGGTTAGAGATGATATGGAGTTTGATACTAGGGAGTCGCCGGAGTCTATCTCCTTTGAGCCTACTAGAACATGGAAAGGAAATACGTCGTTTCTAGAGGGTGAAGATTTGATGTATGATGTGGATACGTTGAAGGGAAGCAGCGATTCGTTTGAGGATGGTGATCCGAGTTTATTTGCTGGTGCTAGTCATCCCCCGGAGCCGGTTGATACAGATCTTATGAGAACGGTTTATGTACCGATAGGTCAAAACAAATCTGAGGCTGGATGCTTGCTTAAGAACTTGTCCATGAAGGGTCCTTTCCTAGAAGATCTCTCGATCCGTGTTCCTGCGAAGAAACCAAGTCCAATTGTTCTTTCCCCTCAAGGAAGTCTAGGTGAAGAAATAAATGACACAGGGAACTTGTCCTCCCCCTTTGCAGGTTCTCGAGCATCTCAGAATACTGAGAACTCTCTCCTTGCACCGGATTCTGAGGAAAAGGAATGTGTTTGGGATGCTTCTTTGCCTCCTACTCCTAGTGGCGATGTTAGTCCACATAGTAGTATCGATAGTATTGGTGTTGTCAAGGCAATGAGCATTGCTAATAGTTGCGCTAGTACATATCGGAGCGATGCAATCACCAGTGACGGCATGCTTAGTTTAGATAGGAACTTTGATAGCATTAAGGGTAGTGTAAGGGGTGATTCACTTGAGAGTGCAAAAACTAGTGTGAGTCGTCCAAGTGATAGCAGTGGCCTCAGTGATGACAGTAACTGGAGCAACCTTACCGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCAAGGTGGAATGCTATTCTTGCTGTTCGATTACGGGATGGAATTTTGGGCATGAGTCATTTTCGATTACTCAAACGACTTGGATGTGGTGACATTGGGAGTGTATATCTCTCAGAGCTGAGTGGAACTAGGTGTTATTTTGCAATGAAAGTTATGGATAAGGCATCCTTAGCAAGCAGAAAGAAGCTAACTAGAGCACAGACAGAGAGGGAGATATTGCAGTTGCTAGACCATCCATTTCTTCCAACTTTGTATACACATTTTGAGACTGACCGTTTCTCCTGTTTGGTAATGGAATATTGTCCTGGTGGTGACCTGCACACTCTAAGGCAGCGGCAACCTGGGAAACATTTCTCTGAATATGCTGCGCGCTTTTATGCTGCTGAGGTACTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTTGTGTACAGAGACCTTAAACCTGAAAATGTGTTGGTCCGTGACGATGGTCACATAATGCTCTCAGATTTTGATCTTTCCCTCAGATGTACTGTTTTGCCAACACTTATTAGAGCTTTTGACGGTGACCCTTCAAAACGGGCTGGTGGTGCATTCTGTGTTCAACCTGCTTGTATTGAGCCTTCGTCAGTATGCATACAGCCTGCGTGTTTTATTCCTCGTCTCTTTCCTCAGAAAAACAAGAAATCAAGAAAGCCAAGAGCTGAACCCGGGTTTCCTTCCAGCAGACTTCCCGAGCTTGTAGCTGAGCCTACTGCTGCTCGATCTATGTCCTTTGTCGGTACCCACGAATATCTTGCTCCTGAAATTATCAAAGGGGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATATTCTTGCACGAATTATTATATGGCAAAACCCCTTTCAAAGGGTCAGGAAACCGTGCTACGCTTTTCAATGTAGTAGGTCAGCAGCTCAAATTTCCCGAGTCTCCCGCAACCAGTTATGCTAGCAGGGATCTGATCCGCGGCTTGCTGGTGAAGGAGCCACAGCATCGTCTCGGAGTTAAAAGAGGTGCAACTGAGATCAAGCAGCATCCTTTCTTTGAAGGCGTGAACTGGGCGTTGATTAGGTGCAGCACACCACCAGAAGTACCAAGACCAGTGGAAAACGAACCGCCACCGCCACCACCAATGAAGGTTGGACCAGCAATTGATGCTGTTGGGTTTGGCAGTACTAGTAAGAGGATGTCAGGTAACAATGAAATGAAGCCTGGGGGTAAATATCTGGATTTTGAGTTCTTTTAA 2298 0.4582 MERFSEHKVLPRNLPVLVEVSPNMGTARETVPRINGHEISNARWISARELSQLPQARDVPMTRLASIREVAQLSNARILLVRDDMEFDTRESPESISFEPTRTWKGNTSFLEGEDLMYDVDTLKGSSDSFEDGDPSLFAGASHPPEPVDTDLMRTVYVPIGQNKSEAGCLLKNLSMKGPFLEDLSIRVPAKKPSPIVLSPQGSLGEEINDTGNLSSPFAGSRASQNTENSLLAPDSEEKECVWDASLPPTPSGDVSPHSSIDSIGVVKAMSIANSCASTYRSDAITSDGMLSLDRNFDSIKGSVRGDSLESAKTSVSRPSDSSGLSDDSNWSNLTGSANKPHKGNDPRWNAILAVRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVLPTLIRAFDGDPSKRAGGAFCVQPACIEPSSVCIQPACFIPRLFPQKNKKSRKPRAEPGFPSSRLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENEPPPPPPMKVGPAIDAVGFGSTSKRMSGNNEMKPGGKYLDFEFF 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03325 765 MobiDBLite consensus disorder prediction 204 232 - -
Vivi7g03325 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Vivi7g03325 765 PANTHER FLIPPASE KINASE 1-RELATED 127 722 - -
Vivi7g03325 765 FunFam serine/threonine-protein kinase D6PK-like 594 717 - -
Vivi7g03325 765 Gene3D Phosphorylase Kinase; domain 1 365 450 - -
Vivi7g03325 765 Gene3D Transferase(Phosphotransferase) domain 1 451 517 - -
Vivi7g03325 765 MobiDBLite consensus disorder prediction 308 340 - -
Vivi7g03325 765 SMART serkin_6 367 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03325 765 FunFam Serine/threonine-protein kinase D6PK-like 365 450 - -
Vivi7g03325 765 CDD STKc_phototropin_like 365 715 - -
Vivi7g03325 765 MobiDBLite consensus disorder prediction 308 343 - -
Vivi7g03325 765 MobiDBLite consensus disorder prediction 197 259 - -
Vivi7g03325 765 SUPERFAMILY Protein kinase-like (PK-like) 348 727 IPR011009 -
Vivi7g03325 765 Pfam Protein kinase domain 596 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03325 765 Pfam Protein kinase domain 368 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03325 765 FunFam serine/threonine-protein kinase D6PK-like 451 518 - -
Vivi7g03325 765 Gene3D Transferase(Phosphotransferase) domain 1 595 716 - -
Vivi7g03325 765 ProSiteProfiles Protein kinase domain profile. 367 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03325 Vivi-Chr7 98768827 98772151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03325 1 765 AGC Kinase Gene Family AT2G44830 65.700 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi7g03325 Pkinase 2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03325 - - mtr:25500048 1401.34