Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03324 ATGAGTCATTTTCGATTACTCAAACGACTTGGATGTGGTGACATTGGGAGTGTATATCTCTCAGAGCTGAGTGGAACTAGGTGTTATTTTGCAATGAAAGTTATGGATAAGGCATCCTTAGCAAGCAGAAAGAAGCTAACTAGAGCACAGACAGAGAGGGAGATATTGCAGTTGCTAGACCATCCATTTCTTCCAACTTTGTATACACATTTTGAGACTGACCGTTTCTCCTGTTTGGTAATGGAATATTGTCCTGGTGGTGACCTGCACACTCTAAGGCAGCGGCAACCTGGGAAACATTTCTCTGAATATGCTGCGCGCTTTTATGCTGCTGAGGTACTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTTGTGTACAGAGACCTTAAACCTGAAAATGTGTTGGTCCGTGACGATGGTCACATAATGCTCTCAGATTTTGATCTTTCCCTCAGATGTACTGTTTTGCCAACACTTATTAGAGCTTTTGACGGTGACCCTTCAAAACGGGCTGGTGGTGCATTCTGTGTTCAACCTGCTTGTATTGAGCCTTCGTCAGTATGCATACAGCCTGCGTGTTTTATTCCTCGTCTCTTTCCTCAGAAAAACAAGAAATCAAGAAAGCCAAGAGCTGAACCCGGGTTTCCTTCCAGCAGACTTCCCGAGCTTGTAGCTGAGCCTACTGCTGCTCGATCTATGTCCTTTGTCGGTACCCACGAATATCTTGCTCCTGAAATTATCAAAGGGGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATATTCTTGCACGAATTATTATATGGCAAAACCCCTTTCAAAGGGTCAGGAAACCGTGCTACGCTTTTCAATGTAGTAGGTCAGCAGCTCAAATTTCCCGAGTCTCCCGCAACCAGTTATGCTAGCAGGGATCTGATCCGCGGCTTGCTGGTGAAGGAGCCACAGCATCGTCTCGGAGTTAAAAGAGGTGCAACTGAGATCAAGCAGCATCCTTTCTTTGAAGGCGTGAACTGGGCGTTGATTAGGTGCAGCACACCACCAGAAGTACCAAGACCAGTGGAAAACGAACCGCCACCGCCACCACCAATGAAGGTTGGACCAGCAATTGATGCTGTTGGGTTTGGCAGTACTAGTAAGAGGATGTCAGGTAACAATGAAATGAAGCCTGGGGGTAAATATCTGGATTTTGAGTTCTTTTAA 1209 0.4566 MSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVLPTLIRAFDGDPSKRAGGAFCVQPACIEPSSVCIQPACFIPRLFPQKNKKSRKPRAEPGFPSSRLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENEPPPPPPMKVGPAIDAVGFGSTSKRMSGNNEMKPGGKYLDFEFF 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03324 402 Pfam Protein kinase domain 233 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03324 402 Pfam Protein kinase domain 5 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03324 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Vivi7g03324 402 FunFam Serine/threonine-protein kinase D6PK-like 2 87 - -
Vivi7g03324 402 Gene3D Transferase(Phosphotransferase) domain 1 232 353 - -
Vivi7g03324 402 Gene3D Phosphorylase Kinase; domain 1 2 87 - -
Vivi7g03324 402 SUPERFAMILY Protein kinase-like (PK-like) 2 370 IPR011009 -
Vivi7g03324 402 PANTHER FLIPPASE KINASE 1-RELATED 1 359 - -
Vivi7g03324 402 ProSiteProfiles Protein kinase domain profile. 4 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03324 402 FunFam serine/threonine-protein kinase D6PK-like 88 155 - -
Vivi7g03324 402 SMART serkin_6 4 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03324 402 FunFam serine/threonine-protein kinase D6PK-like 231 354 - -
Vivi7g03324 402 Gene3D Transferase(Phosphotransferase) domain 1 88 154 - -
Vivi7g03324 402 CDD STKc_phototropin_like 2 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03324 Vivi-Chr7 98760901 98764562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03324 1 402 AGC Kinase Gene Family AT2G44830 81.401 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi7g03324 Pkinase 6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03324 - - vvo:131616092 787.334