Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03322 ATGAACACTCATGCATGGAACAACAATGCAAACGCCTTTGAAAATTTTGAATCTTCCATAACGACGCCGTTTTATGACACTTCAGCTCCGGTAGCACCGGCGATGCCAATCTCCCGGAATCCGAGTTTTCGCAGCATATTATTGGCGGAGAATTGGGCGGAGCTACCATTGAAGGAGGACGATACCGACGACATGGTAATCTACGGGACTTTGCGCGAGGCTGCCGTTACAACTGGCTGGTTCCCCGGTAATGAGGTGAACAATGTTGATGTAGGTGTGAAAATCGAAGAACAAGGTGAAAACAGTAGCACTGCAGCGGCGCGTGTGGTTCAGGCGCCACCAACAAATGGTAAAAAGTTAGGCTTCCGAGGAGTTAGGAGAAGGCCTTGGGGAAAGTATGCTGCTGAGATAAGAGATCCTAAGGCTATGTTTGAGAGTTTG 441 0.4875 MNTHAWNNNANAFENFESSITTPFYDTSAPVAPAMPISRNPSFRSILLAENWAELPLKEDDTDDMVIYGTLREAAVTTGWFPGNEVNNVDVGVKIEEQGENSSTAAARVVQAPPTNGKKLGFRGVRRRPWGKYAAEIRDPKAMFESL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03322 147 Gene3D AP2/ERF domain 121 145 IPR036955 GO:0003700|GO:0006355
Vivi7g03322 147 ProSiteProfiles AP2/ERF domain profile. 121 147 IPR001471 GO:0003700|GO:0006355
Vivi7g03322 147 PANTHER DNA-BINDING DOMAIN 102 141 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03322 Vivi-Chr7 98708195 98708694 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03322 39 141 AP2-EREBP Transcription Factor Family AT2G44840 44.660 1.10e-23 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03322 K09286 - gmx:100793366 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03322 7 98708195 98708694 Vivi7g03322 7 98708195 98708694 ECH