Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03321 ATGGATGCTACAATATTATTGTCTTGTGATTTTCCTTCATTTCAATCTCTTGATCAAATAGAACATTACCTGTTTGATGTTGAACATGAACACCAACATGATTTTCAACCTCTCTTCATGAATGCTAATTCCAACAACCAAACTGTAGAAGCTATTAACATTAACAACTCCAACAATGTTAACGGCAATACACATAAACCTCGCGAGCTGGTACCGGAATGGAAGAGATATAGAGGGGTGAGGCGAAGGCCGTGGGGGAAATTTGCGGCGGAGATAAGAGATCCGAAGAAGAATGGAGCTAGGGTTTGGCTTGGAACTTACAAAACTGAAGAAGAAGCTGGTTTGGCTTATGATAAAGCTGCTTTTAAGATGTATGGTAGAAAAGCCAAGATCAATTTTCCCCACCTCATTGGTTGTGATGATGCACCCGCAGACTCAAAGAAGAGTTTGGCTGAGACTAATTTGGAGTGTTCGGGAGGGACAAAGAAGAGGAAGAATTTAGTTGATGTGTTGAATAGGTTAGCTAAGAATAAAAGGCAATTAAGTGAAGGATTTGAAATGAGTTTAAGGGCTAATGATGTTGATGTTCATGCATAG 597 0.397 MDATILLSCDFPSFQSLDQIEHYLFDVEHEHQHDFQPLFMNANSNNQTVEAININNSNNVNGNTHKPRELVPEWKRYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYKTEEEAGLAYDKAAFKMYGRKAKINFPHLIGCDDAPADSKKSLAETNLECSGGTKKRKNLVDVLNRLAKNKRQLSEGFEMSLRANDVDVHA 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03321 198 ProSiteProfiles AP2/ERF domain profile. 76 134 IPR001471 GO:0003700|GO:0006355
Vivi7g03321 198 SUPERFAMILY DNA-binding domain 76 135 IPR016177 GO:0003677
Vivi7g03321 198 PANTHER DNA-BINDING DOMAIN 53 161 IPR044808 GO:0003700|GO:0009873
Vivi7g03321 198 FunFam Ethylene-responsive transcription factor 2 75 135 - -
Vivi7g03321 198 Gene3D AP2/ERF domain 75 135 IPR036955 GO:0003700|GO:0006355
Vivi7g03321 198 CDD AP2 75 136 IPR001471 GO:0003700|GO:0006355
Vivi7g03321 198 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Vivi7g03321 198 PRINTS Ethylene responsive element binding protein signature 116 136 IPR001471 GO:0003700|GO:0006355
Vivi7g03321 198 Pfam AP2 domain 76 126 IPR001471 GO:0003700|GO:0006355
Vivi7g03321 198 SMART rav1_2 76 140 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03321 Vivi-Chr7 98700605 98701205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03321 64 139 AP2-EREBP Transcription Factor Family AT2G44840 71.053 5.05e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vivi7g03321 AP2 9.4e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03321 7 98700605 98701205 Vivi7g03321 7 98700605 98701205 ECH
Vivi7g03321 7 98700605 98701205 Vivi6g03116 6 119965596 119969536 PCT