Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03309 ATGCTACTGCTCTTATCTTCACCATCATCCTCTTCCTCACTCATGCAATCTCTTCCATTGAAATTCCTTTGTGCTGTACAAGGACAAGGAGAATCAAATCATGGATGCACTAATAAAAACCAAAAGGATTACATAGTGCAGGATGGTTCCATATTACAGTCTGAGAAAGTATTAAGAAGGAAACTTATGCTTTCTGCTTTGGTCACAGCTGTTGTTTTTCCAACTTTATCTTCTGATGCCAAGACGAAAAATATGAATCCATATAATGAAAAACGTGTTTTACAACAAAATAGGAATATACAAAAACAGAACAATGCACCAGATGACTTCCCAAATTTCATTAGAGAAGGTTTTGAAGTTAAAGTGATAGCACCAGATGACTATATAAAACGTGGTTCGGGGCTAATATACCGGGATTTTGAAGTTGGTACAGGTGATTGTCCAAAGGATGGTCAGCAGGTCACATTTCATTATGTTGGCTATAACGAATCCGGCCGCCGTATTGACAGCACTTATTTACAAGGTTCTCCTGCCAAAATCCGCATGGGTAACAAGGCACTGGTTCCAGGATTTGAGGAAGGAATTAGTGACATGAAAGCTGGTGGAAAGAGAAGAATCATTATTCCCCCTGATCTCGGACCCCCGGTAGGGCCTTCAACATTTTTCAGCTCAAAACAATTTGAAGTATTTGATGTTGAATTATTAAGCATACAAAACTGTGAGAGAAGAACAATAGGATTTTATTCTGATGTTGTATGCAATTGA 765 0.3843 MLLLLSSPSSSSSLMQSLPLKFLCAVQGQGESNHGCTNKNQKDYIVQDGSILQSEKVLRRKLMLSALVTAVVFPTLSSDAKTKNMNPYNEKRVLQQNRNIQKQNNAPDDFPNFIREGFEVKVIAPDDYIKRGSGLIYRDFEVGTGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGSPAKIRMGNKALVPGFEEGISDMKAGGKRRIIIPPDLGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIGFYSDVVCN 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03309 254 Gene3D - 85 244 IPR046357 GO:0003755
Vivi7g03309 254 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 148 213 IPR001179 GO:0003755
Vivi7g03309 254 SUPERFAMILY FKBP-like 72 238 - -
Vivi7g03309 254 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 151 238 IPR001179 GO:0003755
Vivi7g03309 254 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 4 254 IPR044239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03309 Vivi-Chr7 98637939 98640950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03309 141 240 Calmodulin-binding Proteins AT5G48570 32.353 1.63e-09 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03309 7 98637939 98640950 Vivi7g03309 7 98637939 98640950 ECH