Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03303 ATGAGAGTTATGCTGTTAACCCTTTCACGCCATTTCTGTACCACCAGCAAAAACATCACAACAACCTTAAAATCCTCAAACCTGAAAACCCCTTGTCGGTACAAGAAAGCTACTCTGTCACAAGCTCAACAGTCACTCACTGATTACCTCCACGCCACAAGGTCCATCCCTTACGCTTTCGCTGATCAAATTTCCAAAAACTCCATTCATTCCCTCTCCAATCTCATTTCAAAGTTGGGTTCTTTTTCATCTTCTAATTTCCCCAAGAAGCTTGACAAGTTCTTAAGGTACAACCCAATTAATGAATTTGAGTTTTTCTTTGAAAGCATTGGAATTCAGTATGCTCAAATTTCTCATTTGTTGCCTCATGATAAGTTCTTCTTTTCTGAAGATGGGTCGCTTCTTGATTCTGCTTGTGTGCTTTGTGAATTTGGGTTTCCTTGGGATAGGCTTGGGGTGCTTTATGTGGAGAGTGGTTTTTTGTTTAGGATGAGTGGTTCTGAGATAAAGGGTAGGCTTTGTTGGTTTCAAAGATATGGTTTTTGTAATGTGCAAATTGTGGGGATATGTTTGACTTTTCCTTTTGTTTTTGGTGTGGAGGAAGGGAGATTGGTTGATGAGATTGATGGGTTGCTTTGTGAGTTGAAGTTGGTGTTTTTGGATTTTGATTTGGGTGGTTCTGTTGAAGGGAATGTCGATGTTTGGCATGAGATTTGTAGGAAAGTAAAAGTGTTTTATGATTTGAGTGATGGTAAGGGGAAGATAGGTGAACTCGTCGGAAGGAATAAACATGTCATTCTTGAATATAGAGAAGAGGATTTGATTGAAAAAGTTGAGTATTTTTGTAGATTCGGTGTTGAGAAAGAGGAAGTAGGTCAATTGATTCTACAAGGTTCGGAGTTGTTGAATCTTGATTTTGAAAAGCCGGTGATTAACGTGTTGAAGTTGTTGAAACATGTTGGAATGAGCTCTAAAGGTCTTGGTGATGTAAGGAAGAATTACGCTCATGCGTTGGGAACAATAAAAATCGAGAATCTTCCTAACGTCATGAGGGCTATGGGTTTACTAGAATGGTTTTTTGATAGAATCAAGGATGGGAATCATATGCTTTTGGTGAATTTTATCGAAAGCTATCCCAATGAAGAACATGATAAAGTATATCAAAGTGGTTTGAAGACAATTCATAATGCAAGAACACCGACTCACAATATGAGTAAATTAAATTTCATGCATGCTAATGGATTTGGTGAAAATGCTATGACCATGAATATCTTAACTCACATGCATGGAACAAGTGAGGAGTTACAAAAGAGATTTGATTGTCTTCTACATTTAGGGATTGAATTCTCGAAGCTGTGTAAGATAATCACAAAGCAACCAAAGGTTCTAAGCCAAAATCCCGAAACACTAGAGAAAAAGATTAATTTCTTACGCCAAGAGATGGGAAAGTCGTTAGAGATTTTGGACACTTTTCCAGCATTTATAAGTTTTGACTTAGAGAACCGAATTAAGCCGAGGTTCAGATTCCATATGTGGGTTTTGGAAAAGGGATTGTCTTCCAAAAACTATTCCATTGCAAGCATGATTGCAACTAGTGACAAGAATTTTGTTGGCCGTGCTTTTAAAATTCACCCGGCCGCTCCAAAACATTGGTTTGAGCAATTCTATCCTAAAAAATTTTGA 1683 0.3779 MRVMLLTLSRHFCTTSKNITTTLKSSNLKTPCRYKKATLSQAQQSLTDYLHATRSIPYAFADQISKNSIHSLSNLISKLGSFSSSNFPKKLDKFLRYNPINEFEFFFESIGIQYAQISHLLPHDKFFFSEDGSLLDSACVLCEFGFPWDRLGVLYVESGFLFRMSGSEIKGRLCWFQRYGFCNVQIVGICLTFPFVFGVEEGRLVDEIDGLLCELKLVFLDFDLGGSVEGNVDVWHEICRKVKVFYDLSDGKGKIGELVGRNKHVILEYREEDLIEKVEYFCRFGVEKEEVGQLILQGSELLNLDFEKPVINVLKLLKHVGMSSKGLGDVRKNYAHALGTIKIENLPNVMRAMGLLEWFFDRIKDGNHMLLVNFIESYPNEEHDKVYQSGLKTIHNARTPTHNMSKLNFMHANGFGENAMTMNILTHMHGTSEELQKRFDCLLHLGIEFSKLCKIITKQPKVLSQNPETLEKKINFLRQEMGKSLEILDTFPAFISFDLENRIKPRFRFHMWVLEKGLSSKNYSIASMIATSDKNFVGRAFKIHPAAPKHWFEQFYPKKF 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03303 560 Gene3D Transcription termination factor 3, mitochondrial 67 221 IPR038538 -
Vivi7g03303 560 PANTHER CGI-12 PROTEIN-RELATED 42 542 IPR003690 GO:0003690|GO:0006355
Vivi7g03303 560 Pfam mTERF 240 339 IPR003690 GO:0003690|GO:0006355
Vivi7g03303 560 Pfam mTERF 432 536 IPR003690 GO:0003690|GO:0006355
Vivi7g03303 560 SMART mt_12 485 519 IPR003690 GO:0003690|GO:0006355
Vivi7g03303 560 SMART mt_12 257 287 IPR003690 GO:0003690|GO:0006355
Vivi7g03303 560 SMART mt_12 292 323 IPR003690 GO:0003690|GO:0006355
Vivi7g03303 560 SMART mt_12 453 484 IPR003690 GO:0003690|GO:0006355
Vivi7g03303 560 Gene3D Transcription termination factor 3, mitochondrial 231 555 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03303 Vivi-Chr7 98602893 98605954 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi7g03303 mTERF 7.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03303 - - gmx:100812245 711.835