Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03285 ATGTTTGGGCGTGGACCAACAAGGAAGAGTGATAACACCAAATATTATGACATTCTTGGTGTTTCAAAAAGTGCCAGTGAAGATGAAATCAAGAAAGCCTATAGAAAGGCAGCGATGAAGAATCATCCTGATAAGGGTGGAGATCCTGAGAAGTTCAAGGAGTTGGGTCAAGCATATGAAGTGTTAAGTGATCCTGAAAAGAAAGAACTGTATGATCAATACGGTGAAGATGCTCTGAAAGAAGGAATGGGAGGAGGAGGAAGCCCATTTCATAACCCATTTGATTTATTCGAATCATTTTTTGGTGGAGCTGGCTTTGGTGGCGGTGGTCCTTCACGGGGAAGAAGACAGAAGCAAGGAGAAGATGTGGTGCATTCTTTAAAGGTTTCCTTGGAGGATGTGTTTAATGGCACTACAAAGAAACTATCTCTGTCTAGGAATGTGTTGTGCGTAAAATGTAAAGGGAAAGGTTCAAAAAGTGGCACAGCTGGAAGGTGTTTTGGATGCCAGGGGACAGGTATGAAGATTACCAGAAGGCAGATTGGTCTGGGCATGATTCAGCAGATGCAACACGTCTGTGCTGACTGCAAAGGAACTGGTGAGGTCATTAGTGAGAGAGATAGATGTCCTCAATGCAAGGCAAACAAGATTACTCAAGAAAAGAAGGTGCTGGAGGTGCATGTGGAAAAGGGAATGCAGCAAGGTCAAAAGATTGTATTTGAAGGACAAGCTGATGAAGCCCCGGACACAATCACCGGAGACATAGTTTTTGTCTTGCAAGTGAAAGGGCATCCAAAGTTCAGGAGGGAGCGCGATGACCTCCATATTGATCACAATCTGAGCTTAACTGAGGCTCTATGTGGCTTTCAATTTACTGTCACACATCTTGATGGAAAGCAACTCTTGGTCAAGTCAAACCCAGGAGAAGTCATCAAGCCAGGTCAACACAAAGCTATTAATGACCAGGGAATGCCACAACACAATAGGCCCTTCATGAGGGGACGCCTATACATCAAGTTTAATGTTGAATTCCCAGAATCAGGTTTTCTTTCCCCTAGCCAAAGCCTTGAATTAGGGAAGATATTACCTCATAAGACAAGCAAGAAGTTGTCGCAAAAGGAAATAGATGATTGCGAGGAGACCACCTTCCATGATGTTGATATTGCAGAGGAGATGCTTCGAAAGAAGCAACAATACCGTGAGGCATATGATGACGATGATGATGAAGATGAGCACTCACACTCAGAGCCTCGGGTACAGTGTGCTCAACAGTAG 1275 0.44 MFGRGPTRKSDNTKYYDILGVSKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKKELYDQYGEDALKEGMGGGGSPFHNPFDLFESFFGGAGFGGGGPSRGRRQKQGEDVVHSLKVSLEDVFNGTTKKLSLSRNVLCVKCKGKGSKSGTAGRCFGCQGTGMKITRRQIGLGMIQQMQHVCADCKGTGEVISERDRCPQCKANKITQEKKVLEVHVEKGMQQGQKIVFEGQADEAPDTITGDIVFVLQVKGHPKFRRERDDLHIDHNLSLTEALCGFQFTVTHLDGKQLLVKSNPGEVIKPGQHKAINDQGMPQHNRPFMRGRLYIKFNVEFPESGFLSPSQSLELGKILPHKTSKKLSQKEIDDCEETTFHDVDIAEEMLRKKQQYREAYDDDDDEDEHSHSEPRVQCAQQ 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03285 424 SMART dnaj_3 13 67 IPR001623 -
Vivi7g03285 424 Pfam DnaJ domain 14 72 IPR001623 -
Vivi7g03285 424 ProSiteProfiles dnaJ domain profile. 14 75 IPR001623 -
Vivi7g03285 424 FunFam DnaJ subfamily A member 2 150 216 - -
Vivi7g03285 424 Pfam DnaJ central domain 150 215 IPR001305 GO:0031072|GO:0051082
Vivi7g03285 424 Gene3D - 113 262 - -
Vivi7g03285 424 Gene3D DnaJ domain 11 112 IPR036869 -
Vivi7g03285 424 PRINTS DnaJ domain signature 16 34 IPR001623 -
Vivi7g03285 424 PRINTS DnaJ domain signature 47 67 IPR001623 -
Vivi7g03285 424 PRINTS DnaJ domain signature 67 86 IPR001623 -
Vivi7g03285 424 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 147 218 IPR036410 -
Vivi7g03285 424 SUPERFAMILY Chaperone J-domain 10 110 IPR036869 -
Vivi7g03285 424 Coils Coil 389 409 - -
Vivi7g03285 424 FunFam DnaJ subfamily A member 2 264 346 - -
Vivi7g03285 424 SUPERFAMILY HSP40/DnaJ peptide-binding domain 121 265 IPR008971 GO:0006457|GO:0051082
Vivi7g03285 424 ProSiteProfiles Zinc finger CR-type profile. 137 221 IPR001305 GO:0031072|GO:0051082
Vivi7g03285 424 CDD DnaJ_C 121 347 - -
Vivi7g03285 424 Pfam DnaJ C terminal domain 124 345 IPR002939 -
Vivi7g03285 424 Gene3D - 150 216 - -
Vivi7g03285 424 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 12 402 IPR044713 GO:0006457|GO:0030544
Vivi7g03285 424 SUPERFAMILY HSP40/DnaJ peptide-binding domain 267 346 IPR008971 GO:0006457|GO:0051082
Vivi7g03285 424 MobiDBLite consensus disorder prediction 397 424 - -
Vivi7g03285 424 FunFam dnaJ protein homolog 11 111 - -
Vivi7g03285 424 Hamap Chaperone protein DnaJ [dnaJ]. 11 396 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Vivi7g03285 424 CDD DnaJ_zf 150 213 IPR001305 GO:0031072|GO:0051082
Vivi7g03285 424 CDD DnaJ 15 64 IPR001623 -
Vivi7g03285 424 Gene3D - 264 346 - -
Vivi7g03285 424 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03285 Vivi-Chr7 98397951 98402184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03285 5 74 C2H2 Transcription Factor Family AT1G74250 40.506 8.80e-11 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03285 7 98397951 98402184 Vivi7g03285 7 98397951 98402184 ECH