Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03284 ATGGAAAAACATCTCAATATAGAAAGTGATGATGCTGATGACAACTTTGCAACAACATCATCATCACCAACTTCAAATAAGAGGAAGAGAATTGAAAGTGATGATAATAACAACATCAAACATCCAAGTTATAGAGGAGTAAGGAAGAGAAATTGGGGAAAATATGTGTGTGAGATTCGTGAGCCAAAGAAAAAATCAAGAATATGGCTTGGAACATACCCTACAGCTGAAATGGCAGCTAGAGCACATGATGTAGCTGCTTTAGCTATAAAGGGTCATTCAGCTTATCTTAATTTTCCTCAATTGGCAAAAGCACTTCCAAGGCCAATAAGCACTTCTCCAAAAGATATTCAAGAAGCTGCTGCAAAAGCAGCTAATAACACTTCATTTGATGAAGCTCAAGTTGAAGCAAGACATGAAGAAGAACACGCCTCGCCGTCTTCGATTCTTGAATCTTCAAGTTCGACATTTACCAACGATGAAGATGATGATGCTGCATTGTTTGATTTGCCGGATCTTTTTCCTGATGATGGAAACAATGGACTTTGTTCCTATTCTTTGAGAAATTCTACTTCGTATCTGTGTGCTGTTGAATCAACTGCACACAGATGTAATGTAGAATTTCTTGAAGATCCGTCTTTTTGGGAGAAATATTTGTAG 660 0.3758 MEKHLNIESDDADDNFATTSSSPTSNKRKRIESDDNNNIKHPSYRGVRKRNWGKYVCEIREPKKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPQLAKALPRPISTSPKDIQEAAAKAANNTSFDEAQVEARHEEEHASPSSILESSSSTFTNDEDDDAALFDLPDLFPDDGNNGLCSYSLRNSTSYLCAVESTAHRCNVEFLEDPSFWEKYL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03284 219 MobiDBLite consensus disorder prediction 27 42 - -
Vivi7g03284 219 CDD AP2 42 100 IPR001471 GO:0003700|GO:0006355
Vivi7g03284 219 MobiDBLite consensus disorder prediction 117 157 - -
Vivi7g03284 219 Gene3D AP2/ERF domain 43 101 IPR036955 GO:0003700|GO:0006355
Vivi7g03284 219 PRINTS Ethylene responsive element binding protein signature 66 82 IPR001471 GO:0003700|GO:0006355
Vivi7g03284 219 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Vivi7g03284 219 ProSiteProfiles AP2/ERF domain profile. 43 100 IPR001471 GO:0003700|GO:0006355
Vivi7g03284 219 MobiDBLite consensus disorder prediction 1 44 - -
Vivi7g03284 219 SUPERFAMILY DNA-binding domain 43 101 IPR016177 GO:0003677
Vivi7g03284 219 Pfam AP2 domain 42 93 IPR001471 GO:0003700|GO:0006355
Vivi7g03284 219 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 20 176 - -
Vivi7g03284 219 FunFam Ethylene-responsive transcription factor 2 42 101 - -
Vivi7g03284 219 MobiDBLite consensus disorder prediction 12 26 - -
Vivi7g03284 219 SMART rav1_2 43 106 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03284 Vivi-Chr7 98372928 98374294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03284 27 214 AP2-EREBP Transcription Factor Family AT2G44940 46.119 4.67e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vivi7g03284 AP2 1.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03284 - - gmx:100776436 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03284 7 98372928 98374294 Vivi7g03284 7 98372928 98374294 ECH