Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03266 ATGTTGGACTATGAATGGGGTAACCCATCAAACATCATGCTGACCGGAAATGAAGATAACTCCGCCGCCGCAGCTTCCGATCAAGCCCACCGTCAAATCTTCGACCATTATGCTTCTCAAGCTATGCTATCCGAGAATTACTTAAACGGGTCCGGGCCCGCCATCAACATGAACAACTGTGATTTCAGCCACCAACACCATCAGCAGCAACAACAACACTTTAGCCCACAAGCCCAGCAGCATCATATGCATCACTCTTTCTTCGACCCACGGGCTTTCCATGGCGGCTCTTCAACAAACTCGTATCCTCCACCTCAACCATCACAGCATCCGTTGCTTTCTCTAGACCCACTTCCTCAAAACTGTGGGCATGGGCATGGACATGGGCCTGGACTCCTTCTTGTCCCGAAATCAGAGGATATTAACAGGCCCATGGACTTTGTCGGTTCGAGGATTGGCCTTAACCTTGGTGGCCGTACTTACTTCTCCTCTTCCGAAGATGACTTCGTGAGCCGACTCTACCGTCGGTCTAGACCGCCTGAACCGGGTTCACATGGTTCTTCCAACTCGCCTAGGTGTCAGGCCGAAGGATGCAATGCTGATCTGTCTCAGGCGAAGCACTACCACCGCCGCCATAAGGTTTGCGAGTTTCACTCCAAGGCAGCTACCGTCATAGCCGCTGGGTTAACTCAGCGATTCTGCCAGCAATGCAGCAGGTTTCATCTTCTTTCTGAGTTTGATAATGGAAAACGTAGCTGCAGAAAGAGATTAGCTGATCATAATCGTCGCAGAAGAAAAACTCAGCACCCAAATACTCAAGAAATTCACAAATCTCACACCACTTTGGAAAATGCTGCTACAAGATCTCCGCCGGAGTCGGGTACTCAATCTTCATCATCGGTGACCGTGGCGGTTTCTCCCCCGGATTATTTTCGACAAAGGTCGTATCAAAGCCCAAGCCCATCAACAAATTCAAGCTCAATGTTTTTCTCAACTGGGTAA 1002 0.496 MLDYEWGNPSNIMLTGNEDNSAAAASDQAHRQIFDHYASQAMLSENYLNGSGPAINMNNCDFSHQHHQQQQQHFSPQAQQHHMHHSFFDPRAFHGGSSTNSYPPPQPSQHPLLSLDPLPQNCGHGHGHGPGLLLVPKSEDINRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPPEPGSHGSSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQHPNTQEIHKSHTTLENAATRSPPESGTQSSSSVTVAVSPPDYFRQRSYQSPSPSTNSSSMFFSTG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03266 333 MobiDBLite consensus disorder prediction 64 82 - -
Vivi7g03266 333 Pfam SBP domain 193 266 IPR004333 GO:0003677
Vivi7g03266 333 Gene3D - 183 254 IPR036893 GO:0003677|GO:0005634
Vivi7g03266 333 ProSiteProfiles Zinc finger SBP-type profile. 190 267 IPR004333 GO:0003677
Vivi7g03266 333 MobiDBLite consensus disorder prediction 88 131 - -
Vivi7g03266 333 FunFam Squamosa promoter-binding-like protein 14 184 254 - -
Vivi7g03266 333 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 175 328 IPR044817 GO:0003677
Vivi7g03266 333 SUPERFAMILY SBT domain 191 270 IPR036893 GO:0003677|GO:0005634
Vivi7g03266 333 MobiDBLite consensus disorder prediction 259 333 - -
Vivi7g03266 333 MobiDBLite consensus disorder prediction 64 83 - -
Vivi7g03266 333 MobiDBLite consensus disorder prediction 274 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03266 Vivi-Chr7 98062277 98064645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03266 1 240 SBP-box Gene Family AT1G02065 47.451 3.21e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Vivi7g03266 SBP 4.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03266 - - gmx:100802206 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03266 7 98062277 98064645 Vivi7g03266 7 98062277 98064645 ECH