Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03248 ATGTTAGTTAGTTCCAGTTGGAGGAAACTTAGAATCAATATCATATCATATCATTTCATGGCTTCTTTGTTTCATCCAACTTCAACTGCAATCTGTTTCTTCTATCCCTCAAAACCCACCTTTCAACCACACAATTTTTCTTTATTAACTAACACTAACACTAATCGTTTCAACATAAACTCTCTCACAAAGTGTAATGCATTTTTGGACAATGTTGTTGATGTGGACCACTTTCCTTCTATCATCCAATCAGGAATACTGCAGTTTCAAGAATTACCAGATATGCAAAGATGGGAGTTTCTTCTGTTTGGTGGACTTATATGGATATACTTAACTTCAAGACCCGGTGTTCTTATTGGTGCCATTGATGCTTACCTTCTTGCTCCTCTTCAACTTGGTTTTGATAATCTATCTGGAAAGAGAAATTTGAAGACACGTGATTTTCTTGTTGGAGATAAAATTGGTGAAGGCTCCTTTGGTGTTGTTTATTCTGGTGTTTTGGTCCCAAAGAATGTGCTCGATGGAGAGGCCAACAACAAGGGAAGAACCAAGGCTGCACTGTTGGATCCCAAAGCCAAAGATAAAGTCATTCTTAAAAAGGTTAAGGTTGAAATTCGAGGGGCTCAAGAATTTGGTGAATTTGAGGAATGGTTTAACTACAGGTTATCTAGAGCAGCACCTGAAACATGTGCTGAGTTTCTTGGAAGTTTTGTGGCTGATAAAACAAACTCAAAGTTTACAAAAGGTGGAAAATGGCTTGTTTGGAAATTTGAGGGAGATCTTACTCTTGCCGATTACATGAAGGGGCGTAGCTTCCCTTCAAACTTAGAATCTGTCATGTTTGGACGTGTCTTGGAAGGTGTAGACTCTTTTCGACGAAATGCATTGATCATCAAGCAAATCATGCGCCAGATAATTACTTCTCTTAAGAAAATTCACGATACAGGCATTGTTCATAGAGATATAAAGCCAGCCAACTTAGTGGTCACGAAACGGGGGCAGATTAAACTTATTGATTTTGGTGCAGCAACAGACCTTCGGATCGGAAAGAATTATGTTCCCGACCGCACCCTTTTGGATCCCGATTATTGTCCGCCAGAACTATATGTGCTCCCAGAAGAAACACCAAGTCCTCCACCTGCGCCAATTGCTGCTTTCTTTTCACCAATCCTATGGCAGTTAAACAGCCCTGATCTGTTTGATATGTATTCCGCTGGGATTGTACTCATGCAAATGGCAATACCAACTTTAAGGTCTCCAGCTGCTTTGAAGAATTTCAATTTGGAATTAAAAAACTGTGGTTATGATTTGAAAAAATGGAGGGAGTATACTCGCCTGAGGCCCGACTTCCAAATTCTTGATAGTGAATCTGGTAGAGGGTGGGACTTAGCAACAAAGCTTATCTCTGAGAGAGGTCCATTAAGAAGAGGACGCTTATCTGCTGCTTCGGCTTTGAGACATCCTTATTTTCTTCTGGGAGGTGATCAGGCAGCTGCAGTTCTTTCAAAATTAAGCCTAAGTAGAAAGTGA 1530 0.4026 MLVSSSWRKLRINIISYHFMASLFHPTSTAICFFYPSKPTFQPHNFSLLTNTNTNRFNINSLTKCNAFLDNVVDVDHFPSIIQSGILQFQELPDMQRWEFLLFGGLIWIYLTSRPGVLIGAIDAYLLAPLQLGFDNLSGKRNLKTRDFLVGDKIGEGSFGVVYSGVLVPKNVLDGEANNKGRTKAALLDPKAKDKVILKKVKVEIRGAQEFGEFEEWFNYRLSRAAPETCAEFLGSFVADKTNSKFTKGGKWLVWKFEGDLTLADYMKGRSFPSNLESVMFGRVLEGVDSFRRNALIIKQIMRQIITSLKKIHDTGIVHRDIKPANLVVTKRGQIKLIDFGAATDLRIGKNYVPDRTLLDPDYCPPELYVLPEETPSPPPAPIAAFFSPILWQLNSPDLFDMYSAGIVLMQMAIPTLRSPAALKNFNLELKNCGYDLKKWREYTRLRPDFQILDSESGRGWDLATKLISERGPLRRGRLSAASALRHPYFLLGGDQAAAVLSKLSLSRK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03248 509 Gene3D Phosphorylase Kinase; domain 1 134 257 - -
Vivi7g03248 509 SMART serkin_6 148 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03248 509 Gene3D Transferase(Phosphotransferase) domain 1 290 492 - -
Vivi7g03248 509 Pfam Protein kinase domain 297 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03248 509 ProSiteProfiles Protein kinase domain profile. 148 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03248 509 SUPERFAMILY Protein kinase-like (PK-like) 143 491 IPR011009 -
Vivi7g03248 509 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 49 509 - -
Vivi7g03248 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03248 Vivi-Chr7 97735674 97738347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03248 148 346 MAP Kinase Kinase Kinase AT3G13530 27.723 8.50e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Vivi7g03248 Pkinase 1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03248 - - psat:127120955 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03248 7 97735674 97738347 Vivi6g02439 6 106029436 106031523 PCT