Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03182 ATGGTAACCCCTTCGCTTCTGCATAATCTAAACCTCCCTCTTCTCTTCAACCCTATTCTCTCACACCAAAGCCCTATCTCTTCAATCTCTCTCAAACCTTCACTACCCCGCTGTTCAAATTCCACCATTGTTCGCGCTCCTTCTTCGCCACCTCCAATTCGCATCAAACCCTACACAAAAATCGAAGCACAGCATGCCCTACAAGAATACCTTTACAACACTCAATGTTACACTTTCATAGACGCTGAATTTATCGCCAAAAATTCTCCGCATTTCATTCATCAACTCATCTCCAGAGTCAGAGTATACAACAGACACTATGCTTTTGATTTTCCTCGGGCTCTCAGAAGGTATCTTATGTATCACCCTATTAATGAATTTGAACCCTTTTTAGAGAGTATAGGGATTCATCCAAGGGAATTGAACTTACTTTTGCCTAAAGATTTGTTTTTTCTTCGTGATGATAGTCTTTTGGTTGATAATTTTCATGTTTTGTTTAATCATGGGGTTCCGAGGAATAGGATGTGGAAGATTTATAGAGAAGCAAGAGAGGTTTTTGGGTATGGGAGTGGCGTTTTGTCGAAGAAATTTGAGAGTTATGAGAATTTGGGGTTGAGTAAATCTTCTGTTGCGAAGCTGTTTGTTTGCTGTCCATTGCTTTTAGTTGGCGACGAGGTTGATCGTCAATTTGTTGTTGTTCTTGATTGGTTGAACAGAATTGGGATTGATATCGGATGGTTTGTGAATTGTATGTGGCCCTCGAGAACATATAGATGGAAAGCGATTATTGATAGTATAGAGTTTTTTCGTCAAGGGGGATGTTCGGAGAAGCAAATGTATGATTTGTTTAAGGCGGATCCGAAATTGTTATTGGAGGGTTTAGGAAAGAGGATGTATTTGGTTATAGGCCGGTTGGTTAAGTTGGGTCTTGACGTGAATGAGATTTGTTTTTGTTTTCGAGAGCATCCTGATATATTGTCAAGTCGGCGTATGAAAAATTTGATGTCGGTGATTGCTTTTATGTATAATATTCGAATGGAACAAGAAGAGACTACTCGTGTTTTGTATAACTACATGCATATCCTTAGCAAACATTCAATAAAAGGTCATACAACTATGTCTAAAGAGTTAGGAGTTGGAAAAGGTGATTTACGTGAAATGATACAGGATGATCCATTAGAATTTTTTAGTTTGGCTGTAAAACTGAAGCAGAAGAAGGATAAAAATGAGTTCTACTATGACCTGCATTTGGGGAAAACAAGTTTCTTGCGGAAACTGGGGTATAATGATAACTCTGAGGAGATGGAAATAGCTATGAAGATGTTTGAAGGGAAAGGTGATAAGTTACAAGAGAGATTTGATTGTCTGGTTGAAGCTGGTTTGGAATATGACACTGTAGTTGGAATGGTAAAGCGAGTTCCTGGGATTCTGAGCATTAAGAAAACTGTAATGCAAAAGAAGATTGATTTCTTAAAAAACACTTTAGGTTACCCGATAGAGTTTCTCGCGAGATATTCAAGGTATTTTTTCCATAATTTGGACAAAATATTTGCAAGATTTGCAATGTACAAGTGGTTGAAGAAGAGGAATGTTATAAATCGCGAGTTATACTTGAGTACCATAATTACACCTTCTGAGAAACAGTTTCTAGAACTCTTTGTGAATACGCATCCTGAAGGTCCAACAGCTTGGCAAACTATAAACAGTTTATCTAAAGAATTTAAGAATTAA 1731 0.3767 MVTPSLLHNLNLPLLFNPILSHQSPISSISLKPSLPRCSNSTIVRAPSSPPPIRIKPYTKIEAQHALQEYLYNTQCYTFIDAEFIAKNSPHFIHQLISRVRVYNRHYAFDFPRALRRYLMYHPINEFEPFLESIGIHPRELNLLLPKDLFFLRDDSLLVDNFHVLFNHGVPRNRMWKIYREAREVFGYGSGVLSKKFESYENLGLSKSSVAKLFVCCPLLLVGDEVDRQFVVVLDWLNRIGIDIGWFVNCMWPSRTYRWKAIIDSIEFFRQGGCSEKQMYDLFKADPKLLLEGLGKRMYLVIGRLVKLGLDVNEICFCFREHPDILSSRRMKNLMSVIAFMYNIRMEQEETTRVLYNYMHILSKHSIKGHTTMSKELGVGKGDLREMIQDDPLEFFSLAVKLKQKKDKNEFYYDLHLGKTSFLRKLGYNDNSEEMEIAMKMFEGKGDKLQERFDCLVEAGLEYDTVVGMVKRVPGILSIKKTVMQKKIDFLKNTLGYPIEFLARYSRYFFHNLDKIFARFAMYKWLKKRNVINRELYLSTIITPSEKQFLELFVNTHPEGPTAWQTINSLSKEFKN 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03182 576 Gene3D Transcription termination factor 3, mitochondrial 298 565 IPR038538 -
Vivi7g03182 576 SMART mt_12 467 498 IPR003690 GO:0003690|GO:0006355
Vivi7g03182 576 SMART mt_12 280 311 IPR003690 GO:0003690|GO:0006355
Vivi7g03182 576 SMART mt_12 176 206 IPR003690 GO:0003690|GO:0006355
Vivi7g03182 576 SMART mt_12 316 347 IPR003690 GO:0003690|GO:0006355
Vivi7g03182 576 SMART mt_12 211 243 IPR003690 GO:0003690|GO:0006355
Vivi7g03182 576 SMART mt_12 499 532 IPR003690 GO:0003690|GO:0006355
Vivi7g03182 576 Pfam mTERF 441 550 IPR003690 GO:0003690|GO:0006355
Vivi7g03182 576 Pfam mTERF 266 419 IPR003690 GO:0003690|GO:0006355
Vivi7g03182 576 Gene3D Transcription termination factor 3, mitochondrial 110 297 IPR038538 -
Vivi7g03182 576 PANTHER CGI-12 PROTEIN-RELATED 198 557 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03182 Vivi-Chr7 96730243 96731973 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi7g03182 mTERF 5.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03182 - - psat:127118043 831.632