Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03180 ATGGTAACCCTTTCGCTTCTGCATAATCTCAATCTCATTCTTCTCTTCAACCCTCCCACACTCCAAAACCCTATCTCTTCAATCTCTCTCAAACCCTCACAACTCCGCTGTTCCCATTCCGCCACTGTTCCCGCTCCTTCTCCGCCACCTCCAATTCGCGTCAAACCCTACGCAAAAATCGAAGCAAAGCATGCCCTACGTGATTACCTTGTCAACACTCGAGGTTACAGTTTCATAGATGCAGATTTTATCTCCAAAAACTCTCCGCATTTTATCAATTCGCTTATCTTCAGAGTCGGAATCAACATCAGAGACCATGATTTTCCTCGGGCTGTAAGAAGGTATCTTATGCTTCACCCTATTAATGAATTTGAACCGTTTTTAGAGAGTATAGGGATTGAGCAAAGGGAATTGAAGTTACATCTGCCTAAAGATTTGTTTTTTCTTAGTGACGATAGTGTTTTGGTTGATAATTTTCATGTTTTGTTTAATCACGGGGTTCCGAGGAATAGGATGGGGAAGATTTATAGAGAAGCAAGAGAGGTTTTTGGTTATGGGAGTGGCGTTTTGTCGAAGAAATTTGAGAGTTATGAGAATTTGGGGTTGAGTAAATCTTCTGTTGTGAAGCTGTTTGTTTGTCGTCCATTGCTTTTAGTTGGCGACGAGGTTGATCGTCAATTTGTTGTTGTTCTTGATCGGTTGAAGAGAATTGGGATTGATATCGGATGGTTTGTGAATTGTATGTGGCCCCCGAGAACATATATATGGAAAGAGATTATTGATAGTATAGAGTTTTTTCGTCAAGGGGGATATTCTGAGAAAGAAATGTATGATTTGTTTACGGCGGATCCTAAATTGTTGTTGAATGGTTTAGGAAAGAGGACATATTTGGTTGTAGGTCGGTTGATTAAGTCGGGTCTTGACGTGGATGAGATTTGTTCTTGTTTCAGAGAGCATCCTGATGTGTTGTCAAGTCCGCGTATGAAAAATTTGATGTTTGTGATTGCTTTTATGTATAATATTCGAATGGACCAAGATGCTATTGCTCATGTTTTGTATAACTACATGCATGAACTTAGCAAACTTTCGATAAAAGGTTATACAACTATGTCTAAAGAGTTGGGAGTTCGAGAAGGTGATTTATGTGAAATGATCCAGGATGATCCGTTAAAATTTTTTAGTTCGGCTTTAAAACAGAAGCAAAAGAGGGATATAGATAAATTCTACTATGACCCGCATAGTTATTTTGAGAAAACAAGTTTCTTGCAGAAACTGGGATATAATGATAACTCTGAGGAGATGGAAATAGCTATGAAGATGTTTATAGGGAAAGGTGATAAGTTACAAGAGAGATTTGATTGTCTGATTGAAGCTGGTTTGGATTATGACACTGTAGTCGAAATGGTAAAGCGAGTTCCTGGGGTTCTGAACGTTAGGAAAACTCTAATGCTAAAGAAGATTGATTTCTTAAAAAACACTTTAGGTTTCCCAATAGAAGCTCTCGTGGGATATCCAACGTATTTTACCAATAACTTGGACCAAATGTATGCAAGATTTGCAATGTATGAGTGGTTGAAGAAGAGGACTGATATAAATCCCGAGCTATCCCTCACTACCATATTTGCAACTTCTGAGAAACGGTTTCTAGAAATGTTTGTGAATAAGCATCCTGAAGGTCCAACGACTTGGCAAGCTATAAACAGTTTATCTGACAAATTTAAGAATTAA 1728 0.3837 MVTLSLLHNLNLILLFNPPTLQNPISSISLKPSQLRCSHSATVPAPSPPPPIRVKPYAKIEAKHALRDYLVNTRGYSFIDADFISKNSPHFINSLIFRVGINIRDHDFPRAVRRYLMLHPINEFEPFLESIGIEQRELKLHLPKDLFFLSDDSVLVDNFHVLFNHGVPRNRMGKIYREAREVFGYGSGVLSKKFESYENLGLSKSSVVKLFVCRPLLLVGDEVDRQFVVVLDRLKRIGIDIGWFVNCMWPPRTYIWKEIIDSIEFFRQGGYSEKEMYDLFTADPKLLLNGLGKRTYLVVGRLIKSGLDVDEICSCFREHPDVLSSPRMKNLMFVIAFMYNIRMDQDAIAHVLYNYMHELSKLSIKGYTTMSKELGVREGDLCEMIQDDPLKFFSSALKQKQKRDIDKFYYDPHSYFEKTSFLQKLGYNDNSEEMEIAMKMFIGKGDKLQERFDCLIEAGLDYDTVVEMVKRVPGVLNVRKTLMLKKIDFLKNTLGFPIEALVGYPTYFTNNLDQMYARFAMYEWLKKRTDINPELSLTTIFATSEKRFLEMFVNKHPEGPTTWQAINSLSDKFKN 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03180 575 Pfam mTERF 419 549 IPR003690 GO:0003690|GO:0006355
Vivi7g03180 575 Pfam mTERF 263 400 IPR003690 GO:0003690|GO:0006355
Vivi7g03180 575 Gene3D Transcription termination factor 3, mitochondrial 295 564 IPR038538 -
Vivi7g03180 575 Gene3D Transcription termination factor 3, mitochondrial 108 294 IPR038538 -
Vivi7g03180 575 PANTHER CGI-12 PROTEIN-RELATED 261 556 IPR003690 GO:0003690|GO:0006355
Vivi7g03180 575 SMART mt_12 313 344 IPR003690 GO:0003690|GO:0006355
Vivi7g03180 575 SMART mt_12 208 240 IPR003690 GO:0003690|GO:0006355
Vivi7g03180 575 SMART mt_12 466 497 IPR003690 GO:0003690|GO:0006355
Vivi7g03180 575 SMART mt_12 173 203 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03180 Vivi-Chr7 96723476 96725203 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi7g03180 mTERF 1.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03180 - - vvo:131621087 825.083