Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03179 ATGGTAACCCTTTCGCTTCTGCATAATCTAAACCTCCCTCTTCTCTTCAACCCTTCCACACACCAAAACCCTATCCTCAAAATCCAAAGCCCTATCTCTTCAATCTCTCTCAAACCCTCACAACTCCGCTGTTCCCATTCCGCCACTGTTCCCGCTCCTTCTCCGCCACCTCCAGTTCGCATCTCACGCGGCCCAAAAATCGAAGCACGCCATGCCCCACGTGATTACCTTGTCATCACTCGAGGTTACAGTTTCATAGATGCAGATTTTATCTCCAAAAACTCTCCACATTTTATCAATTCGCTTATCTTCAGAGTCAGAATCAACATCAGAGACCATGATTTTCCTCAGGCTCTCAGAAGAATGTGGAAGATTTATAGAGATGCAAGAGAGGTTTTTGGGTATGGGAGTGGCGTTTTGTCCAAGAAATTTGAGAGTTATGAGAATTTGGGGTTGAGTAAATCTTCTGTTGTGAAGCTGTTTGTTTGTTGTCCATTGCTTTTAGTTGGCAACGAGGTTGATCCTCAATTTGTTGTTGTTCTTGATCGGTTGAAGAGAATTGGGATTGATATCGGATGGTTTGTCAATTGTATGTTGCCCTCGAGAACATATAGATGGAAAGCGATTATTGATAATATAGAGTTTTTTCGTCAAGGGGGATATTCTGAGAAAGAAATGTATGATTTGTTTACGGCGGATCCTAAATTGTTGTTGGATGGTTTAGGAAAGAGGACATATTTGGTTGTAGGTCAGTTGATTAAGTCCGGTCTTGACGTGGATGAGATTTGTTCTTGTTTCAGAGAGCATCCTGATGTGTTGTCAAGTCCGCGTATGACAAATTTGATGTTTGTGATTTCTTTTATGTATAATGTTCGAATGGACCAAGATGCTATTGCTCATGTTTTGTATAACTACATGCATGAACTTAGCAAACTTTCGATAAAAGGTTATACAACTATGTCTAAAGAGTTGGGAGTTCGAGAAGGTGATTTATGTGAAATGATCCAGGATGATCCGTTAGAATTTTTTAGTTTGGCTTTAAAACCGAAGCAAAAGAAAGATATAAATAAATTCAGATATGACCCGCATAATTATTTGGAGAAAACAAGTTTCTTGCAGAAGCTAGGATATAATGATAACTCTGAGGAGATGGAAATAGCTATGAAGAGGTTTGAAGGGAAAGGTGATAAGTTACAAGAGAGATTTGATTGTCTGGTTGAAGCTGGTTTGGAATATAACACTGTAGTTGGAATGGTAAAGCGAATTCCTAGTATTCTAAGCATTGAGAAAACTCTATTGCAAAAGAAGATTGATTTCTTAAAAAACACTTTAGGTTACCCGATAGAATCTCTCGTGGGATATCGATATCCATCGTATTTTACCAATAACTTGGACCAAATGTATGCAAGATTTGCAATGTATGAGTGGTTGAAGAGGAGGACTGATATAAATCCCGAGCTATCCCTCGCTACCATATTTGCATCTTCTGAGAAACGGTTTCTAAAAATCTTTGTGAATAAGCATCCTGAAGGTCCAACGACTTGGCAAGCTATAAACAGTTTATCTGACAAATTTAAGAATTAA 1584 0.387 MVTLSLLHNLNLPLLFNPSTHQNPILKIQSPISSISLKPSQLRCSHSATVPAPSPPPPVRISRGPKIEARHAPRDYLVITRGYSFIDADFISKNSPHFINSLIFRVRINIRDHDFPQALRRMWKIYRDAREVFGYGSGVLSKKFESYENLGLSKSSVVKLFVCCPLLLVGNEVDPQFVVVLDRLKRIGIDIGWFVNCMLPSRTYRWKAIIDNIEFFRQGGYSEKEMYDLFTADPKLLLDGLGKRTYLVVGQLIKSGLDVDEICSCFREHPDVLSSPRMTNLMFVISFMYNVRMDQDAIAHVLYNYMHELSKLSIKGYTTMSKELGVREGDLCEMIQDDPLEFFSLALKPKQKKDINKFRYDPHNYLEKTSFLQKLGYNDNSEEMEIAMKRFEGKGDKLQERFDCLVEAGLEYNTVVGMVKRIPSILSIEKTLLQKKIDFLKNTLGYPIESLVGYRYPSYFTNNLDQMYARFAMYEWLKRRTDINPELSLATIFASSEKRFLKIFVNKHPEGPTTWQAINSLSDKFKN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03179 527 PANTHER CGI-12 PROTEIN-RELATED 322 508 IPR003690 GO:0003690|GO:0006355
Vivi7g03179 527 SMART mt_12 263 294 IPR003690 GO:0003690|GO:0006355
Vivi7g03179 527 SMART mt_12 416 447 IPR003690 GO:0003690|GO:0006355
Vivi7g03179 527 SMART mt_12 158 190 IPR003690 GO:0003690|GO:0006355
Vivi7g03179 527 SMART mt_12 123 153 IPR003690 GO:0003690|GO:0006355
Vivi7g03179 527 Coils Coil 381 401 - -
Vivi7g03179 527 Gene3D Transcription termination factor 3, mitochondrial 246 516 IPR038538 -
Vivi7g03179 527 Gene3D Transcription termination factor 3, mitochondrial 111 245 IPR038538 -
Vivi7g03179 527 Pfam mTERF 395 501 IPR003690 GO:0003690|GO:0006355
Vivi7g03179 527 Pfam mTERF 213 378 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03179 Vivi-Chr7 96716012 96718314 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi7g03179 mTERF 1.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03179 - - vvo:131621087 966.066