Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03178 ATGGTAACCCTTTCGCTTCTGCATAATCTAAACCTCCCTCTTCTCTTCAACCCTTCCACACACCAAAACCCTATCCTCAAAATCCAAAGCCCTATCTCTTCAATCTCTCTCAAACCCTCACAACTCCGCTGTTCCCATTCCGCCACTGTTCCCGCTCCTTCTCCGCCACCTCCAGTTCGCATCTCACGCGGCCCAAAAATCGAAGCACGCCATGCCCCACGTGATTACCTTGTCATCACTCGAGGTTACAGTTTCATAGATGCAGATTTTATCTCCAAAAACTCTCCACATTTTATCAATTCGCTTATCTTCAGAGTCAGAATCAACATCAGAGACCATGATTTTCCTCAGGCTCTCAGAAGGTATCTTATGCTTCACCCTATTAATGAATTTGAACCCTTTTTAGAGAGTATAGGGATTCATCCAAGGGAATTGAACTTACTTTTGCCTAAAGATTTGATTTTTCTTAATGATGATAGTGTTTTGGTTGATAATTTTCATGTTTTGTTTAATCACGGGGTTCCGAGGAATAGAATGTGGAAGATTTATAGAGATGCAAGAGAGGTTTTTGGGTATGGGAGTGGCGTTTTGTCCAAGAAATTTGAGAGTTATGAGAATTTGGGGTTGAGTAAATCTTCTGTTGTGAAGCTGTTTGTTTGTTGTCCATTGCTTTTAGTTGGCAACGAGGTTGATCCTCAATTTGTTGTTGTTCTTGATCGGTTGAAGAGAATTGGGATTGATATCGGATGGTTTGTCAATTGTATGTTGCCCTCGAGAACATATAGATGGAAAGCGATTATTGATAATATAGAGTTTTTTCGTCAAGGGGGATATTCTGAGAAAGAAATGTATGATTTGTTTACGGCGGATCCTAAATTGTTGTTGGATGGTTTAGGAAAGAGGACATATTTGGTTGTAGGTCAGTTGATTAAGTCCGGTCTTGACGTGGATGAGATTTGTTCTTGTTTCAGAGAGCATCCTGATGTGTTGTCAAGTCCGCGTATGACAAATTTGATGTTTGTGATTTCTTTTATGTATAATGTTCGAATGGACCAAGATGCTATTGCTCATGTTTTGTATAACTACATGCATGAACTTAGCAAACTTTCGATAAAAGGTTATACAACTATGTCTAAAGAGTTGGGAGTTCGAGAAGGTGATTTATGTGAAATGATCCAGGATGATCCGTTAGAATTTTTTAGTTTGGCTTTAAAACCGAAGCAAAAGAAAGATATAAATAAATTCAGATATGACCCGCATAATTATTTGGAGAAAACAAGTTTCTTGCAGAAGCTAGGATATAATGATAACTCTGAGGAGATGGAAATAGCTATGAAGAGGTTTGAAGGGAAAGGTGATAAGTTACAAGAGAGATTTGATTGTCTGGTTGAAGCTGGTTTGGAATATAACACTGTAGTTGGAATGGTAAAGCGAATTCCTAGTATTCTAAGCATTGAGAAAACTCTATTGCAAAAGAAGATTGATTTCTTAAAAAACACTTTAGGTTACCCGATAGAATCTCTCGTGGGATATCGATATCCATCGTATTTTACCAATAACTTGGACCAAATGTATGCAAGATTTGCAATGTATGAGTGGTTGAAGAGGAGGACTGATATAAATCCCGAGCTATCCCTCGCTACCATATTTGCATCTTCTGAGAAACGGTTTCTAAAAATCTTTGTGAATAAGCATCCTGAAGGTCCAACGACTTGGCAAGCTATAAACAGTTTATCTGACAAATTTAAGAATTAA 1755 0.3812 MVTLSLLHNLNLPLLFNPSTHQNPILKIQSPISSISLKPSQLRCSHSATVPAPSPPPPVRISRGPKIEARHAPRDYLVITRGYSFIDADFISKNSPHFINSLIFRVRINIRDHDFPQALRRYLMLHPINEFEPFLESIGIHPRELNLLLPKDLIFLNDDSVLVDNFHVLFNHGVPRNRMWKIYRDAREVFGYGSGVLSKKFESYENLGLSKSSVVKLFVCCPLLLVGNEVDPQFVVVLDRLKRIGIDIGWFVNCMLPSRTYRWKAIIDNIEFFRQGGYSEKEMYDLFTADPKLLLDGLGKRTYLVVGQLIKSGLDVDEICSCFREHPDVLSSPRMTNLMFVISFMYNVRMDQDAIAHVLYNYMHELSKLSIKGYTTMSKELGVREGDLCEMIQDDPLEFFSLALKPKQKKDINKFRYDPHNYLEKTSFLQKLGYNDNSEEMEIAMKRFEGKGDKLQERFDCLVEAGLEYNTVVGMVKRIPSILSIEKTLLQKKIDFLKNTLGYPIESLVGYRYPSYFTNNLDQMYARFAMYEWLKRRTDINPELSLATIFASSEKRFLKIFVNKHPEGPTTWQAINSLSDKFKN 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03178 584 Coils Coil 438 458 - -
Vivi7g03178 584 Gene3D Transcription termination factor 3, mitochondrial 302 573 IPR038538 -
Vivi7g03178 584 PANTHER CGI-12 PROTEIN-RELATED 379 565 IPR003690 GO:0003690|GO:0006355
Vivi7g03178 584 Gene3D Transcription termination factor 3, mitochondrial 113 301 IPR038538 -
Vivi7g03178 584 Pfam mTERF 453 558 IPR003690 GO:0003690|GO:0006355
Vivi7g03178 584 Pfam mTERF 270 435 IPR003690 GO:0003690|GO:0006355
Vivi7g03178 584 SMART mt_12 320 351 IPR003690 GO:0003690|GO:0006355
Vivi7g03178 584 SMART mt_12 473 504 IPR003690 GO:0003690|GO:0006355
Vivi7g03178 584 SMART mt_12 215 247 IPR003690 GO:0003690|GO:0006355
Vivi7g03178 584 SMART mt_12 180 210 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03178 Vivi-Chr7 96716012 96718314 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi7g03178 mTERF 2.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03178 - - vvo:131621087 852.432