Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03162 ATGAGGCCTACAGACTTGCTTAGGATTCTGAATAAGCAGTTTCTTGGACTCGCCGGTGACACTGCAAATGTTGTTGCTAAGAAGCTAACATCGCCTCCTCCTCTTGTGTCCCGCAAACCAGCATTTATAGATGCATTTCTGTACAAGATGAAAAAGAATCCAGAACTTCTGAAGAACAAAAGCATTTGGTCACGGAGATCCACTATCTTGCCAGAATTTGTTGATTCCCAAGTCAAGATTTACAACGGGAAAACCATGATTCGTTGTAAGATCACCGAGGGAAAAGTCGGTCATAAGTTTGGTGAGTTTGCTCTCACCAGGAAACGCAAATCTAGAGACCAACCTAATGCCAAAGTGAAACAACTCAAGAAAAAGAAGTGA 381 0.4226 MRPTDLLRILNKQFLGLAGDTANVVAKKLTSPPPLVSRKPAFIDAFLYKMKKNPELLKNKSIWSRRSTILPEFVDSQVKIYNGKTMIRCKITEGKVGHKFGEFALTRKRKSRDQPNAKVKQLKKKK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03162 126 SUPERFAMILY Ribosomal protein S19 38 111 IPR023575 GO:0003735|GO:0005840|GO:0006412
Vivi7g03162 126 ProSitePatterns Ribosomal protein S19 signature. 82 106 IPR020934 GO:0003723
Vivi7g03162 126 FunFam Ribosomal protein S19, mitochondrial 35 121 - -
Vivi7g03162 126 MobiDBLite consensus disorder prediction 107 126 - -
Vivi7g03162 126 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 31 121 IPR002222 GO:0003735|GO:0005840|GO:0006412
Vivi7g03162 126 Gene3D 30s Ribosomal Protein S19; Chain A 36 121 IPR023575 GO:0003735|GO:0005840|GO:0006412
Vivi7g03162 126 Hamap 30S ribosomal protein S19 [rpsS]. 6 118 IPR002222 GO:0003735|GO:0005840|GO:0006412
Vivi7g03162 126 PRINTS Ribosomal protein S19 family signature 62 81 IPR002222 GO:0003735|GO:0005840|GO:0006412
Vivi7g03162 126 PRINTS Ribosomal protein S19 family signature 94 109 IPR002222 GO:0003735|GO:0005840|GO:0006412
Vivi7g03162 126 PRINTS Ribosomal protein S19 family signature 82 94 IPR002222 GO:0003735|GO:0005840|GO:0006412
Vivi7g03162 126 Pfam Ribosomal protein S19 47 110 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03162 Vivi-Chr7 96450427 96453848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03162 36 117 Cytoplasmic Ribosomal Protein Gene Family AT1G04270 28.571 2.95e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03162 K02965 - gmx:100782150 210.69