Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03143 ATGTCCACAAATCTTCTAGCTTTTCATTTCATTCTCATCATGTTTTTCTCTTCACTTCTAAGTCTCTCTACCATCCAAGTTTATGGCATTCTCACTTTTGCTTCCTTTGCTTTTGCTGCCACTAATTCTACACAACATCATGTTAGTGAAGAAGCAATTGCACTTTTAAATTGGAAAACCAACCTTGACAACCAAAGCCAAGCTTCATTATCCTCTTGGACACCCCTTTCAAGTCCTTGCAATTGGGAAGGAATTACTTGTGATGAAAAAACCAAATTTGTGACAATTATAAATGTTGCAAACTTTGGTCTTAAAGGTACTCTTTCAAGTTTCAACTTCTCATCTTTTCCTATGCTTCAAACATTGGATATAAGTAACAATTCATTTCAAGGAAATATTCCACATCAAATAGGTAACTTGTCCAAAATTTCTAAACTAAAAATGAATCATAATTTCTTCAATGGTTCCCTTCCCTCAATAGTTGGAATGTTGATGAATCTTGTTGAACTTGATTTATCAGCTAACTATCTCTCCGGCGAAATCCCTTCATTAAAAAACTTGAAGAGCTTAGAAAAACTTGTGCTATACGGAAACTCTCTTTCTGGACCGATTCCTATTGAGTTAGGCGCGATCTCTTCTCTTAGAACTATCAAATTGCTAAAGAACAATTTTTGCGGTCAAATTCCATTTTCCATTGGAAATTTAGCAAATTTGAGGATACTTCAGCTTAGTGAGAACCATCTTCATGGATCAATTCCTTCATCTATTGGAAACTTGACAAAACTCATAGAACTGTCATTTTCAGAAAACCAACTTTCTGGATCAATTCCTTCTTCAATAGGAAACTTGATCAATCTAGAAAGACTTTCTTTTTCACAAAATCATCTTTCTGGTCCCATTCCTTCTACATTTGGAAACTTGACCAAACTAACCTTTCTATTACTTTACAATAACAAACTCAATGGTAGCATTACAGAATCCATGAAAAATATTACCAATTTGCAGAGTTTACAACTAAGTTCAAATGATTTCACTGGCCAATTGCCACATGAAATTTGCCTTGGTGGTTATTTGACAAATTTTTCTGCTAATCAAAATCATTTCAGTGGTTTTGTTCCAAGAAGCTTGAAGAATTGCTCAACCCTTCTTAGGCTTAACCTTGCGGAAAATATGATTGCTGGAAATATTTCACATGATTTTGGTGTTTATCCAAATTTGAGCTTCATTGATTTGAGTCACAATCAATTATATGGCGAAATTCCGCCAAATTTGGTGAAAAGTGGTAATCTAATAGGCCTAGTGATCTCTAATAACAAATTATCAGGTACTATACCTCGAGAATTAGGTCAAGCGTCTAGGTTACAATCGCTTCAACTCTCTTCAAATCATCTAACAGGAAAAATTCCTAAAGAGCTTTGTAACTTGACTTCATTGTTTCAACTCTCCATGAGTAACAATGAACTTTCTGGAGAGATTCCTACAGAAATAGGATCCATGCAAGGACTCAGCATCTTGAATCTTGCAGCAAATAAACTTAGTGGCTCAATTCCAAAGCAAATTGGGAAGGTTCTCAAATTAGTTCAACTGAATTTGAGCAGTAATGAGTTCATGGAAACCATTCCACTTGAGTTTAACAGGTTGCAATCTCTTGAAAATCTTGATCTTGGTGGAAATATGTTAAATGGAGAAATACCAGAATCACTTGGAAAGTTGCAAAAGTTGAACACATTGAACCTCTCTCACAATAAGCTCCATGGAATCGTTCCGTCTAATTTTGAGTATTTGATAAGCTTGACAATTGTTGACATATCTTATAACCGATTAGAGGGTTCGATTCCTAACAATCAAGCATTTCTTAACTCGCCGTTTGAATCATTGAGAAACAATAAAGGCTTGTGTGGTAATGCTTCAGGCTTGGATCCTTGCATAAATCGTAAACACAAAAGTGTGATATTGTCACTATCTGTTACTTTGAGTATTCTATTTGTTTTTGTCTTCTTTTTTGCCGGTTCTTTATATATTCATTTGAAAAATGCAAGAAGAATTCAAAAGCAAGCGAAAGAAGAACGAGAACAGATTCAAGATGTTTTTTCCATATGGAGTTATGATGGAAAAATGGTTTATGAAAACATCATTGAAGCAACCGAGGATTTTGATGAGAAATATCTTATTGGTGAAGGCGGTTCTGGTTCGGTTTACAAGGCTAATTTACCCTCAAGACAAGTTGTAGCTGTGAAAAAACTTCATGCTGAAGTTGACAGTGAAATGCATAACTTCAAGGCTTTTACTAACGAGGTTAAAGCGTTGACGCAAATCAAGCATCGTAACATTGTGAAGTTACATGGATTTTGCTCGCATCCGCGCCACTCTTTTGTGGTTTACGAGTTTCTTGAAGGAGGGAATTTAGATAATATGTTGAGAAATGATACACAAGTAACAATGTTTGATTGGAAAAAGAGAGTGAATGCTGTTAAGGGTGTGACAAATGCTCTTTATCATATGCATCATGGTTGCTTTCCACCTATTGTTCATCGCGACATATCGAGCAAAAATGTTCTTTTAGATTCGGATTATCAAGCTTATATCTCAGACTTTGGAACAGCAAAGATTCTGAATCTTGATTCACACAACTCAACAACATTTGCTGGCACTTATGGTTACGCAGCACCAGAACTTGCGTATACGCATGAAGTGAATGAGAAATGCGATGTGTTTAGTTTTGGAGTGCTATGTTTGGAAATAATAATGGGAAAGCATCCAGGGGACCTCATTTCTACATTGTTTTCATCATCTGAAGCACCAATAGCTCATAGTTGGCTACTCAAAGATGTACTAGATCAAAGACTTACTATACCAGAAAATTCAGTTGCTAAGGATGTGATCTTGGTTGCGAAATTGGCATTTGCTTGCTTGACTGAAAATCCACGTTCTCGACCGAGTATGAAACAAGTGTACAACATGTTTGTGATGCCAAAATTACATTCCATGGAGACATTCCGAATCGTCACACTTGGCCAACTTTTGAATTAG 3030 0.3587 MSTNLLAFHFILIMFFSSLLSLSTIQVYGILTFASFAFAATNSTQHHVSEEAIALLNWKTNLDNQSQASLSSWTPLSSPCNWEGITCDEKTKFVTIINVANFGLKGTLSSFNFSSFPMLQTLDISNNSFQGNIPHQIGNLSKISKLKMNHNFFNGSLPSIVGMLMNLVELDLSANYLSGEIPSLKNLKSLEKLVLYGNSLSGPIPIELGAISSLRTIKLLKNNFCGQIPFSIGNLANLRILQLSENHLHGSIPSSIGNLTKLIELSFSENQLSGSIPSSIGNLINLERLSFSQNHLSGPIPSTFGNLTKLTFLLLYNNKLNGSITESMKNITNLQSLQLSSNDFTGQLPHEICLGGYLTNFSANQNHFSGFVPRSLKNCSTLLRLNLAENMIAGNISHDFGVYPNLSFIDLSHNQLYGEIPPNLVKSGNLIGLVISNNKLSGTIPRELGQASRLQSLQLSSNHLTGKIPKELCNLTSLFQLSMSNNELSGEIPTEIGSMQGLSILNLAANKLSGSIPKQIGKVLKLVQLNLSSNEFMETIPLEFNRLQSLENLDLGGNMLNGEIPESLGKLQKLNTLNLSHNKLHGIVPSNFEYLISLTIVDISYNRLEGSIPNNQAFLNSPFESLRNNKGLCGNASGLDPCINRKHKSVILSLSVTLSILFVFVFFFAGSLYIHLKNARRIQKQAKEEREQIQDVFSIWSYDGKMVYENIIEATEDFDEKYLIGEGGSGSVYKANLPSRQVVAVKKLHAEVDSEMHNFKAFTNEVKALTQIKHRNIVKLHGFCSHPRHSFVVYEFLEGGNLDNMLRNDTQVTMFDWKKRVNAVKGVTNALYHMHHGCFPPIVHRDISSKNVLLDSDYQAYISDFGTAKILNLDSHNSTTFAGTYGYAAPELAYTHEVNEKCDVFSFGVLCLEIIMGKHPGDLISTLFSSSEAPIAHSWLLKDVLDQRLTIPENSVAKDVILVAKLAFACLTENPRSRPSMKQVYNMFVMPKLHSMETFRIVTLGQLLN 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03143 1009 ProSitePatterns Tyrosine protein kinases specific active-site signature. 842 854 IPR008266 GO:0004672|GO:0006468
Vivi7g03143 1009 Coils Coil 676 696 - -
Vivi7g03143 1009 Gene3D Ribonuclease Inhibitor 251 353 IPR032675 -
Vivi7g03143 1009 Gene3D Ribonuclease Inhibitor 354 644 IPR032675 -
Vivi7g03143 1009 SMART LRR_typ_2 475 499 IPR003591 -
Vivi7g03143 1009 SMART LRR_typ_2 595 620 IPR003591 -
Vivi7g03143 1009 SMART LRR_typ_2 403 427 IPR003591 -
Vivi7g03143 1009 SMART LRR_typ_2 571 594 IPR003591 -
Vivi7g03143 1009 SMART LRR_typ_2 235 259 IPR003591 -
Vivi7g03143 1009 SMART LRR_typ_2 331 355 IPR003591 -
Vivi7g03143 1009 SMART LRR_typ_2 283 306 IPR003591 -
Vivi7g03143 1009 SMART LRR_typ_2 116 140 IPR003591 -
Vivi7g03143 1009 SMART LRR_typ_2 547 570 IPR003591 -
Vivi7g03143 1009 ProSiteProfiles Protein kinase domain profile. 718 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03143 1009 FunFam Leucine-rich repeat receptor protein kinase MSP1 681 796 - -
Vivi7g03143 1009 Pfam Leucine rich repeat 549 608 IPR001611 GO:0005515
Vivi7g03143 1009 Pfam Leucine rich repeat 433 488 IPR001611 GO:0005515
Vivi7g03143 1009 SUPERFAMILY L domain-like 385 634 - -
Vivi7g03143 1009 FunFam Nuclear pore complex protein NUP107 48 206 - -
Vivi7g03143 1009 SUPERFAMILY L domain-like 77 392 - -
Vivi7g03143 1009 Gene3D Ribonuclease Inhibitor 48 250 IPR032675 -
Vivi7g03143 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 331 646 - -
Vivi7g03143 1009 PRINTS Leucine-rich repeat signature 406 419 - -
Vivi7g03143 1009 PRINTS Leucine-rich repeat signature 571 584 - -
Vivi7g03143 1009 ProSiteProfiles Leucine-rich repeat profile. 573 594 IPR001611 GO:0005515
Vivi7g03143 1009 Pfam Protein kinase domain 720 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03143 1009 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 262 990 - -
Vivi7g03143 1009 SUPERFAMILY Protein kinase-like (PK-like) 698 988 IPR011009 -
Vivi7g03143 1009 ProSitePatterns Protein kinases ATP-binding region signature. 724 747 IPR017441 GO:0005524
Vivi7g03143 1009 SMART LRR_sd22_2 571 597 - -
Vivi7g03143 1009 SMART LRR_sd22_2 534 555 - -
Vivi7g03143 1009 SMART LRR_sd22_2 259 285 - -
Vivi7g03143 1009 SMART LRR_sd22_2 164 189 - -
Vivi7g03143 1009 SMART LRR_sd22_2 307 333 - -
Vivi7g03143 1009 ProSiteProfiles Leucine-rich repeat profile. 166 188 IPR001611 GO:0005515
Vivi7g03143 1009 Pfam Leucine rich repeat N-terminal domain 50 88 IPR013210 -
Vivi7g03143 1009 FunFam MDIS1-interacting receptor like kinase 2 797 994 - -
Vivi7g03143 1009 Gene3D Phosphorylase Kinase; domain 1 677 796 - -
Vivi7g03143 1009 FunFam Leucine-rich repeat receptor protein kinase EMS1 228 327 - -
Vivi7g03143 1009 Gene3D Transferase(Phosphotransferase) domain 1 797 998 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03143 Vivi-Chr7 96155905 96159229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03143 22 890 Receptor kinase-like Gene Family AT4G08850 41.649 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi7g03143 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03143 - - gmx:100800924 1229.93