Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03134 ATGACACGCTCAACATTGTTAACACTAATCATCCTCACAACCTTCATCTCCAACACACTATCGCAACAAGAATACGTTGGTCTCAAACAACCAGACTGTGATCACATATACAACTCAACACTAGGCAACATTTGCAACAGCGTCAACTCATGTCAATCCTACCTCACCTTCAACTCAAACCCTTCATACAACACATCCACTTCCATTTCCAACCTCCTCAACGCTTCATCCTCCCTCGTTTCCCAGTCCAACAACATCTCCACCCTCCAAATCATCCCCTCCAACACAATCATAACCGTCCCCGTTACCTGTTCCTGCTCCGGTAACAACAAATACTACCAACATAACGCTACCTACACTTTGAATACCCTCGGTGAAACGTATTTCTCTGTCGCTAATTACACCTACCAGACTCTTACCTCATGTCAAGCTCTTATAGCTCAGAATCCTTACGGTATTCGAAACCTCACTGTTGGTCTCAACATAACAGTTCCTCTCAGATGTGCTTGTCCCACCAAGAAACAAACTGATCAAGGCTTCAAGTATCTTCTCACCTACTTGATCTCTGATGGTGATACGGTTTCTTCCATTGCTGATATTTTCGGCGTTGATCAACAAAGCATTCTTGATGCTAACGAGCTTTCTTCTACTTCCACTATTTACGCTTTCTCACCACTTTCAGTCCCTCTCAAAACCGAACCACCCAAAAAAATAACAAGAGCAGCTTCACCTCCGGAGTCTCCTCCACCTCCACCGCCAGTAGACAGTGGTTCCTCCTCTTCCAAGAAATGGATCATTGTCGGTGTCGTGGTTGGGGTTGTTGTATTGCTTCTGGTGATTCTTGCTGTGTTTTCCCTCTGTTTCTATAAACGGAAGCAGCCGCCTAAGCTACCACCGCCGGCGGTTCAGAAATTATGGGACTCTAACGCCAAGAAGACTACCTCAACAACTCAATCTTGGTCTCTTTCTTCTGAAGGGATTCGTTATGCGGTTGACTCGTTGACTCAGTACAAGTTTCAAGAATTGCAAAATGCAACCATGTTTTTCAGTGAAGAGAACAAGATTAAAGGTTCTGTATATAAAGCTTCCTTTAAAGGTGATGCTGCTGCGGTTAAGATTCTGAAAGGTGATGTTTCTTCCGAGATAAACATTTTGAAGAGAATTAACCATGCTAATATTATAAGGTTGTCTGGTTTTTGTGTCTACAAAGGTAACACTTATCTTGTTTATGAGTTTGCTGAGAACAAGTCTCTTGATGATTGGCTTCACTCCGAGGATTCGAATTCTACGTGTTTGAGTTGGTTTCAGAGAGTTCAGATTGCTCATGATGTTGCTGATGCACTTAACTACCTTCATAATTATGCTAATCCACCTCATGTTCATAAGAATTTGAAAACTGAAAATATTCTTTTAGATGGAAAATTTAGAGGTAAAGTTTCAAATTTTGGGTTGGCGAGAGTTATGGAGAATGATAGTGATGAAGGTTTTCAATTAACAAGACATGTTATAGGAACTCAAGGTTACATGGCTCCTGAATATATTGAGAATGGTTTGATTACTCCAAAGATGGATGTTTTTGCATTTGGTGTTGTGATTTTGGAGCTTCTTTCTGGAAGAGAAGTTGTTGGTGGTGACAAGAATAACGGTTTGGGGGATCAGCTTTTATCTTCAACTGTGAATCAGGTTCTTGAAGGGGAGAATGATAGGGAGAAGCTTAGAGGTTTCATGGATCCAAATTTAAGAGATGAATACCCTATGGATCTTGCATATTCTATGGCTGAGATTGCCAAAAGATGTGTTGCTCGTGATCTGAATTCGAGACCAAATGTTTCTGAAGTTTTTATGGTTCTGTCTAAGATTCAATCCTCGACATTGGATTGGGATCCATCGTCTAGATCTGTTAGCCAAGTTTCTGATAGTTGA 1923 0.4119 MTRSTLLTLIILTTFISNTLSQQEYVGLKQPDCDHIYNSTLGNICNSVNSCQSYLTFNSNPSYNTSTSISNLLNASSSLVSQSNNISTLQIIPSNTIITVPVTCSCSGNNKYYQHNATYTLNTLGETYFSVANYTYQTLTSCQALIAQNPYGIRNLTVGLNITVPLRCACPTKKQTDQGFKYLLTYLISDGDTVSSIADIFGVDQQSILDANELSSTSTIYAFSPLSVPLKTEPPKKITRAASPPESPPPPPPVDSGSSSSKKWIIVGVVVGVVVLLLVILAVFSLCFYKRKQPPKLPPPAVQKLWDSNAKKTTSTTQSWSLSSEGIRYAVDSLTQYKFQELQNATMFFSEENKIKGSVYKASFKGDAAAVKILKGDVSSEINILKRINHANIIRLSGFCVYKGNTYLVYEFAENKSLDDWLHSEDSNSTCLSWFQRVQIAHDVADALNYLHNYANPPHVHKNLKTENILLDGKFRGKVSNFGLARVMENDSDEGFQLTRHVIGTQGYMAPEYIENGLITPKMDVFAFGVVILELLSGREVVGGDKNNGLGDQLLSSTVNQVLEGENDREKLRGFMDPNLRDEYPMDLAYSMAEIAKRCVARDLNSRPNVSEVFMVLSKIQSSTLDWDPSSRSVSQVSDS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03134 640 ProSiteProfiles Protein kinase domain profile. 345 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03134 640 Gene3D Phosphorylase Kinase; domain 1 308 412 - -
Vivi7g03134 640 SUPERFAMILY LysM domain 184 229 IPR036779 -
Vivi7g03134 640 Gene3D Transferase(Phosphotransferase) domain 1 413 633 - -
Vivi7g03134 640 Pfam Protein kinase domain 368 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03134 640 CDD LysM 185 222 IPR018392 -
Vivi7g03134 640 SUPERFAMILY Protein kinase-like (PK-like) 326 614 IPR011009 -
Vivi7g03134 640 SMART LysM_2 185 229 IPR018392 -
Vivi7g03134 640 Gene3D LysM domain 184 240 IPR036779 -
Vivi7g03134 640 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 7 630 - -
Vivi7g03134 640 FunFam PTI1-like tyrosine-protein kinase 3 413 631 - -
Vivi7g03134 640 ProSiteProfiles LysM domain profile. 184 228 IPR018392 -
Vivi7g03134 640 MobiDBLite consensus disorder prediction 241 256 - -
Vivi7g03134 640 Pfam LysM domain 188 229 IPR018392 -
Vivi7g03134 640 MobiDBLite consensus disorder prediction 232 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03134 Vivi-Chr7 96078311 96081203 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03134 7 630 Receptor kinase-like Gene Family AT2G33580 52.680 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi7g03134 Pkinase 4.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03134 - - tpra:123921078 858.211