Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03133 ATGCTACTCCTAAACCACCCCAAAAATTTCAACCCCACCATGGCATGGCCAAAGTTAATAACACTAATCATCTTTTCCTTCATCTCAAACACAATCTCCCAACAAGAATACGTCAACAACAAACAACTAGATTGCGAAAACACATACAACTCAACATCAGGCAACATTTGCAACAGCGTCAATTCATGTCAATCCTACCTCACCTTCAAATCAAATCCCCCATACAACACTCTCTCTTCCATTTCCAAACTCCTCAACGCTTCACCTTCCCTCGTTTCCCAATCCAACAACAACATCTCCACCCTCCAAACCATCCCCTCCGACACAATCCTAACCGTCCCCGTTACCTGTTCCTGTTCCGGTAACAAAAACTACTACCAACACAACACTTCCTACACTCTCAAAACCCTCGGTGAAACCTATTTCTCCGTCGCTAACCTCACCTACGAGGCTCTCACCACCTGTCAAGCTCTTATCGCTCAGAATCCTTCTCACGGTATTCGAAACCTCACTGTTGGTCTCAACATAACTGTTCCTCTCAGATGCGCTTGTCCCACCAAGAAACAGACTGATCAAGGAATCAAGTATCTTCTCACCTACTTGGTCTCTCAGGGTGAATCCGTTTCTTCAATCGCTGATCTTTTCGGCGTTGATCCACAAACCGTTATTGAAGCTAACAAGCTTTCTTCTGCTGCCATTATTTTCTACTTCACACCTATTTTAGTCCCTCTCAAAAACGAACCACCGAAAAATATTATCAAACAAGCCTCCCCGCCGGAGTCTCCGCCGCCGCCTCCACCGGCGAATCCTGAGGATAGTGGCTCTTCCTCTTCTAAGAAATGGGTCATTATTGGTGTCGCGGTTGGGGTTGTTGTTTTGCTTCTAGTAGTTCTTGCTTTGTTTTTCCTCTGTTTCTATAAACGGCAACCGGAACTACCTCCGCCGGTGGGTAAACCTTTCTCAGATTCCGACAACCAGAAGATTTCTGACACTATTACTACTACCTCCACAACTCAATCTTGGTCTCTTTCTTCTGAGGGGATTCGTTATGCGGTTGACTCGTTGACTCAGTACAAGTTTCAGGATTTGCAAAATGCAACCATGTTTTTCAGTGAAGAGAACAAGATTAAAGGTTCTGTCTATAGAGCTTCTTTTAAAGGTGATGCTGCTGCTGTTAAGATTCTGAAAGGCGATGTTTCTTCCGAGATTAACATTTTGAAAAGGATTAACCATGCTAATATTATAAGGCTGTCTGGTCTTTGTGTCTACAAAGGTAACACTTATCTTGTTTATGAGTTTGCTCAGAATAACTCTCTTGATGAATGGCTTCACTCTGAGAACAAGAACAAGGATTATGAGAATTCAAATTCGAATTCGAATTCTACGTGTTTGAGTTGGTTTCAGAGAGTTCAGATTGCTCATGATGTTGCTGATGCTCTTAATTACCTTCATAATTATGCTAATCCACCTCATGTTCATAAGAATTTGAAAAGTGGGAATATTCTTTTGGATGGGAAATTTAGAGGTAAAGTTTCAAATTTTGGGTTGGCGAGAGTTATGGAGAATGAAGATAATGAAGGGTTTCAATTAACAAGACATGTAATAGGGACTCAAGGTTACATGGCTCCTGAATATATTGAGAATGGTTTGATTACTCCAAAGATGGATGTTTTTGCTTTTGGTGTTGTGATTTTGGAGCTTCTTTCTGGAAGAGAAGTTGTTGGTGGTGACAAGAATAATGGTTTGGGAGATCAACTTCTTCTGTCATCAACTGTGAATCAAGTTCTTGAAGGGGAAAATGTTAGGGAGAAGCTTAGAGGTTTCATGGATCCAAATTTGAGAGATGAATACCCTTTGGATCTTGCATATTCAATGGCTGAGATTGCTAAAAGATGTGTTCATCGTGACCTGAATTCAAGACCAAATGTTTCGGAGGTTTTCATGGTTTTGTCTAAGATTCAGTCCTCTACATTAGACTGGGATCCATCTGATGAACTTGAGAGGTCCAGATCTGTTAGCCAAGTTTCTGATAGCAGATAG 2040 0.4147 MLLLNHPKNFNPTMAWPKLITLIIFSFISNTISQQEYVNNKQLDCENTYNSTSGNICNSVNSCQSYLTFKSNPPYNTLSSISKLLNASPSLVSQSNNNISTLQTIPSDTILTVPVTCSCSGNKNYYQHNTSYTLKTLGETYFSVANLTYEALTTCQALIAQNPSHGIRNLTVGLNITVPLRCACPTKKQTDQGIKYLLTYLVSQGESVSSIADLFGVDPQTVIEANKLSSAAIIFYFTPILVPLKNEPPKNIIKQASPPESPPPPPPANPEDSGSSSSKKWVIIGVAVGVVVLLLVVLALFFLCFYKRQPELPPPVGKPFSDSDNQKISDTITTTSTTQSWSLSSEGIRYAVDSLTQYKFQDLQNATMFFSEENKIKGSVYRASFKGDAAAVKILKGDVSSEINILKRINHANIIRLSGLCVYKGNTYLVYEFAQNNSLDEWLHSENKNKDYENSNSNSNSTCLSWFQRVQIAHDVADALNYLHNYANPPHVHKNLKSGNILLDGKFRGKVSNFGLARVMENEDNEGFQLTRHVIGTQGYMAPEYIENGLITPKMDVFAFGVVILELLSGREVVGGDKNNGLGDQLLLSSTVNQVLEGENVREKLRGFMDPNLRDEYPLDLAYSMAEIAKRCVHRDLNSRPNVSEVFMVLSKIQSSTLDWDPSDELERSRSVSQVSDSR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03133 679 ProSiteProfiles Protein kinase domain profile. 366 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03133 679 SMART LysM_2 199 243 IPR018392 -
Vivi7g03133 679 Pfam LysM domain 200 235 IPR018392 -
Vivi7g03133 679 Gene3D Transferase(Phosphotransferase) domain 1 435 671 - -
Vivi7g03133 679 MobiDBLite consensus disorder prediction 251 274 - -
Vivi7g03133 679 Gene3D Phosphorylase Kinase; domain 1 330 433 - -
Vivi7g03133 679 MobiDBLite consensus disorder prediction 255 271 - -
Vivi7g03133 679 MobiDBLite consensus disorder prediction 659 679 - -
Vivi7g03133 679 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 22 663 - -
Vivi7g03133 679 FunFam PTI1-like tyrosine-protein kinase 3 434 664 - -
Vivi7g03133 679 Pfam Protein kinase domain 397 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03133 679 ProSiteProfiles LysM domain profile. 198 242 IPR018392 -
Vivi7g03133 679 CDD LysM 199 235 IPR018392 -
Vivi7g03133 679 MobiDBLite consensus disorder prediction 661 679 - -
Vivi7g03133 679 Gene3D LysM domain 184 254 IPR036779 -
Vivi7g03133 679 SUPERFAMILY Protein kinase-like (PK-like) 350 647 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03133 Vivi-Chr7 96073120 96075478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03133 22 672 Receptor kinase-like Gene Family AT2G33580 53.423 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi7g03133 Pkinase 1.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03133 - - tpra:123921078 960.674