Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03114 ATGGAATTGGAACCAACCAAATTCATATTATCATTTCTATTCTTATTACTAGCCTCTAAATTCTTCACTACAGAATCAAAATGTAGCAAAACATGTGACACAGCTTTAGCTTCTTATTATCTATGGTATGGTTCAAATCTAACCTATGTTTCAAAAATCATGCAATCCAACCTTGTTACAAAACCTGAAGATATTGTCAGTTACAACACAGACACAATCAAAAACAAAGATATGGTCCTATCTTACACAAGAGTGAATGTTCCATTCCCTTGTGATTGCATCAATGATGAGTTTCTTGGTCACACATTTCAGTACCATGTTGGAACAGGTGATACCTATATGTCTGTTGCTAATAGGAATTACTCCAATTTGACAACTTCTGAGTGGTTGCATAGCTTCAATACCTATCCATCAGATAATATTCCTGATACTGGAACTCTTAATGTTACTGTTAATTGTTCTTGTGGGAATAGTCATGTTTCTGAGGATTATGGTTTGTTTATTACTTATCCTCTTAGAATTGAGGATTCTTTGGAATCGATTTCGAATAAGACTAAAGTTGGTGCTGAGTTGCTGCAGAAGTATAACCCTGGTGTGAATTTTAGTCAAGGGAGTGGTTTGGTTTATATTCCTGGGAAAGATGCAAATGGTAACTATGTGCCTTTTCACACGAGCACTGGAGGTCTATCAGGTGGAATTATCACTGGAATATCTCTTGGAGCAGTAGCAGGGCTAGTGCTATTAGGAATTTTTATTTATATTACATGTTACCGGAAGAAGAAACTGCAGAATCAAGAATTTCTCTCAGAAGAAACCAGCGCGATCGTTGAAGTCTCTGGTAATGCTACATATGGAACTTCAAATTCTCTGAGTCCTGCTAATATCATGGGCATTAGGGTGGAAAAATCAGGGGAGTTTTCGTATGAAGAACTAGCGAATGCTACGAATAACTTCAATTTGGCTAACAAAATCGGTCAAGGAGGTTTCGGTGAAGTCTATTACGCCGTGTTGAATGGTGAGAAAGTTGCAGTAAAAAAGATGGACATGAAAGCATCAAAAGAATTTCTTGCTGAGCTTAAGGTGTTGACGCGTGTTCATCACTTGAACTTGGTACGGTTGATTGGATATTGTGTTGAAGGATCGCTTTTCCTTGTGTACGAATACATTGATAATGGAAACTTAAGTCAACATCTTCGCGGTTCAGATGGAGAACCTTTGTCATGGACGGCGAGGGCTAAAATTGCTCTGGATTCAGCAAGAGGTCTTGAATACATTCACGAGCATACCGTGCCCACTTATATTCATCGTGACATAAAGTCCGAAAATATTTTGTTAGACAAAAACTTCTGTGCTAAGGTTGCAGATTTCGGATTAACCAAGCTGATTGATGCGGGAAGTTCATCAGTTCCTACTGCTAATATGGCAGGCACATTTGGTTACATGCCACCAGAATATGCATATGGTAGTGTTTCTTCCAAAATAGATGTATATGCTTTCGGAGTTGTTCTTTATGAACTAATTTCTGCTAAAGGAGCTGTGATAATGAGAGGTGAATCTGGTGCCGATTTAAAAGGCCTTGTAGTTTTGTTTGATGAAGTTTATGATCAACCAAATTCAATAGAAGGTTTTAAAAAACTGGTGGATCCTAGGCTTGGAGATAACTATTCAATTGATTCAGTTTTAAAGATGGCACAACTTGCAAAAGCATGCACAGAGAGTGATCCACAACATCGTCCAAATATGAGCTATGTTGTAGTTGCTCTGACTACATTAACTTCAACAACTGAGGAATGGGATATCACTTCTATATACAAAAATCCAAAACTTGTAAATTTAATGTCAGGAAGATAG 1851 0.376 MELEPTKFILSFLFLLLASKFFTTESKCSKTCDTALASYYLWYGSNLTYVSKIMQSNLVTKPEDIVSYNTDTIKNKDMVLSYTRVNVPFPCDCINDEFLGHTFQYHVGTGDTYMSVANRNYSNLTTSEWLHSFNTYPSDNIPDTGTLNVTVNCSCGNSHVSEDYGLFITYPLRIEDSLESISNKTKVGAELLQKYNPGVNFSQGSGLVYIPGKDANGNYVPFHTSTGGLSGGIITGISLGAVAGLVLLGIFIYITCYRKKKLQNQEFLSEETSAIVEVSGNATYGTSNSLSPANIMGIRVEKSGEFSYEELANATNNFNLANKIGQGGFGEVYYAVLNGEKVAVKKMDMKASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLSQHLRGSDGEPLSWTARAKIALDSARGLEYIHEHTVPTYIHRDIKSENILLDKNFCAKVADFGLTKLIDAGSSSVPTANMAGTFGYMPPEYAYGSVSSKIDVYAFGVVLYELISAKGAVIMRGESGADLKGLVVLFDEVYDQPNSIEGFKKLVDPRLGDNYSIDSVLKMAQLAKACTESDPQHRPNMSYVVVALTTLTSTTEEWDITSIYKNPKLVNLMSGR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03114 616 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Vivi7g03114 616 SMART serkin_6 318 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03114 616 Gene3D Transferase(Phosphotransferase) domain 1 389 608 - -
Vivi7g03114 616 FunFam PTI1-like tyrosine-protein kinase 3 389 602 - -
Vivi7g03114 616 Pfam Protein tyrosine and serine/threonine kinase 319 586 IPR001245 GO:0004672|GO:0006468
Vivi7g03114 616 SUPERFAMILY Protein kinase-like (PK-like) 298 588 IPR011009 -
Vivi7g03114 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Vivi7g03114 616 FunFam LysM receptor kinase 2 297 388 - -
Vivi7g03114 616 CDD STKc_IRAK 324 585 - -
Vivi7g03114 616 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 602 IPR044812 GO:0019199|GO:0045087
Vivi7g03114 616 Gene3D Phosphorylase Kinase; domain 1 292 388 - -
Vivi7g03114 616 ProSiteProfiles Protein kinase domain profile. 318 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03114 Vivi-Chr7 95819372 95823873 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03114 15 616 Receptor kinase-like Gene Family AT3G21630 56.634 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi7g03114 PK_Tyr_Ser-Thr 6.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03114 K13429 - gmx:100803042 849.351