Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03109 ATGGAGAATATGTTCCTTTGTATCCTAGGTCTGGGTAAGGGTGTTGCAGCTGGTATATCTATAGCAGGAATATTTGCGCTTCTGTTATTTGTAATCTGTATATATGTCAAATACTTCCAAAAGAAGGAAGAAGAGAAAGCTAAACTTCCACAAATTTCTACGGCACTTTCAGCGCAAGATGCCTCAGGCAGTGGAGAATATGAAACTTCAGGATCTAGTGGGCATGGTACTGGTAGTACTGCTGGCCTTACAGGAATTATGGTGGCTAAGTCAACTGAATTTTCATATCAAGAACTAGCCAAAGCTACAAATAACTTCAGCTTGGATAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGTACTCAGAGGCGAGAAAACAGCAATTAAGAAGATGGATGTACAAGCGTCCACCGAATTTCTTTGCGAGTTGCAAGTCTTAACACATGTTCATCACTTGAATCTGGTGAGGTTGATCGGATATTGTGTCGAGGGATCACTTTTCCTTGTATATGAACATATTGACAATGGTAACTTGGGTCAATATTTGCACGGTATAGATAAAGCACCATTACCATGGTCGAGTAGGGTGCAAATTGCTCTAGATTCCGCAAGAGGCCTTGAATACATTCATGAACATACTGTACCTGTGTATATCCATCGTGATGTAAAATCAGCAAACATATTAATAGACAAGAACTTGCACGGAAAGGTTGCAGATTTTGGCTTGACAAAACTTATTGAAGTTGGAAACTCCACACTTCACACTCGTCTTGTTGGAACTTTTGGATACATGCCACCAGAATATGCTCAATATGGTGATGTTTCTCCAAAAATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAGCTAATTTCAGCAAAGAATGCTGTTCTAAAGACAGGTGAATCTGCTGTTGAATCAAAGGGTCTTGTAGCCTTGTTTGAAGAAGCACTTAATCAAATTGATCCTTTAGAAGCTCTTCGCAAACTGGTGGATCCTAGGCTTAAAGAAAACTATCCAGTTGATTCTGTTTTAAAGATGGCTCAACTTGGGAGAGCATGTACAAGAGACAATCCATTGCTACGTCCAAGTATGAGATCATTAGTTGTTGCTCTTATGACACTCCTATCACATACTGATGATGATGACACTTTCTATGAAAATCCATCTCTCACAAATCTATTGTCAGAGAGATGA 1209 0.3904 MENMFLCILGLGKGVAAGISIAGIFALLLFVICIYVKYFQKKEEEKAKLPQISTALSAQDASGSGEYETSGSSGHGTGSTAGLTGIMVAKSTEFSYQELAKATNNFSLDNKIGQGGFGAVYYAVLRGEKTAIKKMDVQASTEFLCELQVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGQYLHGIDKAPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNLHGKVADFGLTKLIEVGNSTLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKNAVLKTGESAVESKGLVALFEEALNQIDPLEALRKLVDPRLKENYPVDSVLKMAQLGRACTRDNPLLRPSMRSLVVALMTLLSHTDDDDTFYENPSLTNLLSER 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03109 402 SMART serkin_6 106 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03109 402 Gene3D Phosphorylase Kinase; domain 1 86 176 - -
Vivi7g03109 402 FunFam PTI1-like tyrosine-protein kinase 3 177 390 - -
Vivi7g03109 402 ProSiteProfiles Protein kinase domain profile. 106 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03109 402 ProSitePatterns Protein kinases ATP-binding region signature. 112 134 IPR017441 GO:0005524
Vivi7g03109 402 SUPERFAMILY Protein kinase-like (PK-like) 87 376 IPR011009 -
Vivi7g03109 402 Pfam Protein tyrosine and serine/threonine kinase 107 375 IPR001245 GO:0004672|GO:0006468
Vivi7g03109 402 FunFam LysM receptor kinase 2 85 176 - -
Vivi7g03109 402 Gene3D Transferase(Phosphotransferase) domain 1 177 394 - -
Vivi7g03109 402 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 13 387 IPR044812 GO:0019199|GO:0045087
Vivi7g03109 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03109 Vivi-Chr7 95771005 95774393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03109 10 402 Receptor kinase-like Gene Family AT3G21630 61.675 2.05e-161 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi7g03109 PK_Tyr_Ser-Thr 4.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03109 - K13429 vvo:131616004 761.525