Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03108 ATGATTTTCTTTCTTTCACTTATTGATTCAATGAAACTCAAAAATGGGTTATTATTGTTCTTTATGTTTCTGGATTGTATTTTTCTCAAAGTGGAATCTAAGTGTGTAAAAGGGTGTGATGTAGCTTTAGCTTCCTACTATGTAATGCCTTTAGTTGAACTCTCAAATATAACAACCTTTATGCAATCAAAGATTGTTACCGATTCTTCGGAAGTTATAATCAGGTACAATAGAGACATAGTATTCAGTAATGATAATCTTTTTTCCTATTCTAAAATCAACATTCCATTCCCATGTGAATGTATTGGAGGTGAATTTCTTGGGCATGTGTTTGAATACACAGCAAATGAAGGAGATACTTATGATTTACTTGCAAATACCTATTATGCAAGCTTAACAACTGTTGAGGTTTTGAAAAAGTACAATAGTTATGATCCAAATCATATACCTGCTAAGGCTAAGGTTAATGTCACTGTTAATTGTTCTTGTGGGAACAGTCAGATTTCAAAAGACTATGGCTTGTTTATTACCTATCCGCTTAGGCCTAGGGATACTCTTGAGAAGATTGCAAGCCATTATAAACTTGATGAAGGGGTGATACAAAGTTACAATTTGGGTGTCAATTTCAGCAAAGGCAGTGGGATAGTGTTCTTTCCAGGAAGAGATAAAAATGGAGAATATGTTCCTTTGTATCCTAGAACAGCAGGTCTGGGTAAGGGTGTTGCAGCTGGTATATCTATAGCAGGAATATTTGCGCTTCTGTTATTTGTAATCTGTATATATGTCAAATACTTCCAAAAGAAGGAAGAAGAGAAAGCTAAACTTCCACAAATTTCTACGGCACTTTCAGCGCAAGATGGTAATGCCTCAGGCAGTGGAGAATATGAAACTTCAGGATCTAGTGGGCATGGTACTGGTAGTACTGCTGGCCTTACAGGAATTATGGTGGCTAAGTCAACTGAATTTTCATATCAAGAACTAGCCAAAGCTACAAATAACTTCAGCTTGGATAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGTACTCAGAGGCGAGAAAACAGCAATTAAGAAGATGGATGTACAAGCGTCCACCGAATTTCTTTGCGAGTTGCAAGTCTTAACACATGTTCATCACTTGAATCTGGTGAGGTTGATCGGATATTGTGTCGAGGGATCACTTTTCCTTGTATATGAACATATTGACAATGGTAACTTGGGTCAATATTTGCACGGTATAGATAAAGCACCATTACCATGGTCGAGTAGGGTGCAAATTGCTCTAGATTCCGCAAGAGGCCTTGAATACATTCATGAACATACTGTACCTGTGTATATCCATCGTGATGTAAAATCAGCAAACATATTAATAGACAAGAACTTGCACGGAAAGGTTGCAGATTTTGGCTTGACAAAACTTATTGAAGTTGGAAACTCCACACTTCACACTCGTCTTGTTGGAACTTTTGGATACATGCCACCAGAATATGCTCAATATGGTGATGTTTCTCCAAAAATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAGCTAATTTCAGCAAAGAATGCTGTTCTAAAGACAGGTGAATCTGCTGTTGAATCAAAGGGTCTTGTAGCCTTGTTTGAAGAAGCACTTAATCAAATTGATCCTTTAGAAGCTCTTCGCAAACTGGTGGATCCTAGGCTTAAAGAAAACTATCCAGTTGATTCTGTTTTAAAGATGGCTCAACTTGGGAGAGCATGTACAAGAGACAATCCATTGCTACGTCCAAGTATGAGATCATTAGTTGTTGCTCTTATGACACTCCTATCACATACTGATGATGATGACACTTTCTATGAAAATCCATCTCTCACAAATCTATTGTCAGAGAGATGA 1893 0.3719 MIFFLSLIDSMKLKNGLLLFFMFLDCIFLKVESKCVKGCDVALASYYVMPLVELSNITTFMQSKIVTDSSEVIIRYNRDIVFSNDNLFSYSKINIPFPCECIGGEFLGHVFEYTANEGDTYDLLANTYYASLTTVEVLKKYNSYDPNHIPAKAKVNVTVNCSCGNSQISKDYGLFITYPLRPRDTLEKIASHYKLDEGVIQSYNLGVNFSKGSGIVFFPGRDKNGEYVPLYPRTAGLGKGVAAGISIAGIFALLLFVICIYVKYFQKKEEEKAKLPQISTALSAQDGNASGSGEYETSGSSGHGTGSTAGLTGIMVAKSTEFSYQELAKATNNFSLDNKIGQGGFGAVYYAVLRGEKTAIKKMDVQASTEFLCELQVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGQYLHGIDKAPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNLHGKVADFGLTKLIEVGNSTLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKNAVLKTGESAVESKGLVALFEEALNQIDPLEALRKLVDPRLKENYPVDSVLKMAQLGRACTRDNPLLRPSMRSLVVALMTLLSHTDDDDTFYENPSLTNLLSER 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03108 630 Gene3D Transferase(Phosphotransferase) domain 1 405 622 - -
Vivi7g03108 630 ProSiteProfiles Protein kinase domain profile. 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03108 630 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 17 615 IPR044812 GO:0019199|GO:0045087
Vivi7g03108 630 FunFam LysM receptor kinase 2 313 404 - -
Vivi7g03108 630 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Vivi7g03108 630 FunFam PTI1-like tyrosine-protein kinase 3 405 618 - -
Vivi7g03108 630 Pfam LysM domain 181 208 IPR018392 -
Vivi7g03108 630 Pfam Protein tyrosine and serine/threonine kinase 335 603 IPR001245 GO:0004672|GO:0006468
Vivi7g03108 630 Gene3D Phosphorylase Kinase; domain 1 314 404 - -
Vivi7g03108 630 MobiDBLite consensus disorder prediction 284 304 - -
Vivi7g03108 630 SUPERFAMILY Protein kinase-like (PK-like) 315 604 IPR011009 -
Vivi7g03108 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Vivi7g03108 630 SMART serkin_6 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03108 Vivi-Chr7 95771005 95776172 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03108 11 630 Receptor kinase-like Gene Family AT3G21630 55.183 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi7g03108 PK_Tyr_Ser-Thr 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03108 - K13429 tpra:123921801 996.112