Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03105 ATGAATTTATTAATAACATGTCAACTCTTACTCCAACCAACCATTACTATGTTCCCTCCACATTCTCTAATCAAACATACATTCATAACATCTAAAAGGTATGCATATCAATTTACATTCACAAACCAAACTCTTTCTTCGCTTCTTATTGACCAAATGAAACTAAAATCTTGCTTACTATTGTTTCTTTTTGTGGAGTGTGTTTTTTACAAAGTGGAATCCAAATGTGTGAAAGGGTGTGATATAGCTTTAGCTTCCTACTATGTCATGCCTGCATTTAAACTCCAAAATATAACAAACTTTATGCAATCAAAAATTGTGTCAGAGTTCAATTCTTCTGATGTTTTAATCAGATACAATAGACACGTAGTATCCAATCGCGCTAATATCTTTTCCTATTTTAGAGTCAACGTTCCATTCCCATGTGACTGTATTGGAGGTGAATTTTTGGGACATGTGTTTGAATACACATCAAATGAAAGAGATACTTATGATTTGATTGCAAATTATTATTATGCAAGTTTGACTTCAGTTGAACTTTTGCAAAAGTTCAACAGCTATGATCCAAATCATATACCTATTAAGGCTAAGGTTAATGTTACTGTCAACTGTTCTTGTGGGAACAGCCAGATTTCAAAAGATTATGGGTTGTTTATTACTTATCCGTTAAGGTCTACCGATACTCTTGAGAAGATTGCAAACGAGACTGAACTTGATGAAGGGTTGATACAGAATTTCAATCCTGATGTCAATTTCAGCAAAGGGAGTGGGATTGTGTTCATTCCAGGAATAGATCAAAATGGAGATTATGTTCCTTTGTATCCTAGAACAGCAGGCCTTGCTAAGGGTGCAACTGTTGGCATATCTATAGCAGGAATATTTGGGCTTTTATTACTTGTTATCTGTATCTATGTCAAATACTTCCAAAAGAAGGGAGAAAAGAAAGCGATACAGAAAGAAACTTCTTTGGCTCTTTCAACTCGAAAGGGTAATGTTGTTTCTATATCCAGTGATGTCTCAGGATATGAAACTTCGGGATCTATTGGGCATGCTACTAGCCTTACCGGAGTTATGATGGAAAAGTCAACAGAGTTTTCATATGAAGAACTAGCAAAGGCTACAAATAACTTCAGCTTGGATAGTAAAATTGGTCAAGGTGCATTCGGAACTGTCTATTATGCGGAACTTAGAGGCAAGAAAACTGCAATAAAAAAGATGAAGATCCAAGCAACAAGAGAATTTCTTGCTGAACTCAAAGTCTTAACAAGTGTTTATCACTGGAACCTGGTACAGTTGATTGGATACTGTGTGGAGGGATTTCTATTTCTTGTATATGAATACATGGACAATGGAAACTTAAGCCAACATCTACATGATTCAGAGAGAGAACCGATTCCGTGGACTACGAGGATACAAATTGCTCTAGATGTGGCGAGAGGCCTCGAGTATATTCATGATCATTCAGTTCCTGTATATATCCATCGCGACATAAAATCAGATAATATTTTACTAAATGAAAACTTCACTGGGAAGATTGCAGATTTTGGATTAACCAAACTTACTGATGTTGCAAGTTCAACAGATAACACTATTCATGTGGCAGGCACATTTGGTTACATGCCGCCCGAAAATGCATACGGACGTATTTCTCGCAAAATAGATGTATATGCTTTTGGAGTTGTTCTTTATCAACTAATTTCTGCCAAAGCAGCTGTGATCAAGATCGATAAACATAGTACCGAGTTCACTAGTCTTGAGATTAAGACTAATGAATCTATTGATGAATACAAGAGCCTTGTAGCTTTGTTTGATGAAGTTATTGATCAAGAAGGAGATTCCATAGAAAGTCTAAGAAATTTGGTGGATCCAAGGCTAGGAGATAACTATTCAATTGATTCCATTAACAAGATGGCACAGCTTGCCAAGGATTGCACAAATCGAGATCCAAAAGGGCGTCCAAGAATGAGAGCTGTTGTGGTATCTCTAATGAAACTAAATTCTACTATTGATGATGGAAATATGACAGGTAGTGAAGCACTGAGTCTCACTATGGAGCATGATGAGTTACATTAA 2073 0.3628 MNLLITCQLLLQPTITMFPPHSLIKHTFITSKRYAYQFTFTNQTLSSLLIDQMKLKSCLLLFLFVECVFYKVESKCVKGCDIALASYYVMPAFKLQNITNFMQSKIVSEFNSSDVLIRYNRHVVSNRANIFSYFRVNVPFPCDCIGGEFLGHVFEYTSNERDTYDLIANYYYASLTSVELLQKFNSYDPNHIPIKAKVNVTVNCSCGNSQISKDYGLFITYPLRSTDTLEKIANETELDEGLIQNFNPDVNFSKGSGIVFIPGIDQNGDYVPLYPRTAGLAKGATVGISIAGIFGLLLLVICIYVKYFQKKGEKKAIQKETSLALSTRKGNVVSISSDVSGYETSGSIGHATSLTGVMMEKSTEFSYEELAKATNNFSLDSKIGQGAFGTVYYAELRGKKTAIKKMKIQATREFLAELKVLTSVYHWNLVQLIGYCVEGFLFLVYEYMDNGNLSQHLHDSEREPIPWTTRIQIALDVARGLEYIHDHSVPVYIHRDIKSDNILLNENFTGKIADFGLTKLTDVASSTDNTIHVAGTFGYMPPENAYGRISRKIDVYAFGVVLYQLISAKAAVIKIDKHSTEFTSLEIKTNESIDEYKSLVALFDEVIDQEGDSIESLRNLVDPRLGDNYSIDSINKMAQLAKDCTNRDPKGRPRMRAVVVSLMKLNSTIDDGNMTGSEALSLTMEHDELH 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03105 690 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 57 676 IPR044812 GO:0019199|GO:0045087
Vivi7g03105 690 FunFam LysM receptor kinase 2 356 447 - -
Vivi7g03105 690 SMART serkin_6 377 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03105 690 ProSiteProfiles Protein kinase domain profile. 377 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03105 690 Pfam Protein tyrosine and serine/threonine kinase 378 573 IPR001245 GO:0004672|GO:0006468
Vivi7g03105 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Vivi7g03105 690 Gene3D Phosphorylase Kinase; domain 1 350 447 - -
Vivi7g03105 690 Gene3D Transferase(Phosphotransferase) domain 1 448 681 - -
Vivi7g03105 690 ProSitePatterns Protein kinases ATP-binding region signature. 383 405 IPR017441 GO:0005524
Vivi7g03105 690 SUPERFAMILY Protein kinase-like (PK-like) 358 662 IPR011009 -
Vivi7g03105 690 FunFam PTI1-like tyrosine-protein kinase 3 448 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03105 Vivi-Chr7 95751663 95755363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03105 53 682 Receptor kinase-like Gene Family AT3G21630 49.454 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi7g03105 PK_Tyr_Ser-Thr 7.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03105 - K13429 vvo:131616003 1367.06