Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03084 ATGTCAGACGACATGCTGGTTCATTTTGCGTCGAATTCTTCTAACCAATCGGATCAGTCTCTGCCTACAAAGATGGCTAAGTTGGAAGCTCGAATGGCGGGAAAAGCTTCCTCCGCTGTTTCTCAACAACCAGGTTGGCCTTCTGTATCTTCTTCAGCTGGGAAATTCGGTGGTCCAGCTGAGGAAATAGTGAAGCCTTCTCCTTCTTCAAGTGATTCTGATGATGACAATGGTGGGGAATTCTTGATTCAAGCCAACACACGGAAGCGGCTTAAAGTTCAAGAAGATGTTAACGAGGCTCTTACTGATGGAAGACAAACTAGTTTGGAGGCTGTGGAGACAAAAAATAATATTGATGCAAATAGAAAGAAATCTGGCCGTGGAAGAGGGGGTTCTGGTTCAGGTAGAGGCCGTGGTTCCAAATCTAACGATCATACCAGAACACAAAATTCTCATCCGACTTCAGATGCATCCCATAAAGATGGTAGACTCAAAGATCAGTTTCATAGTGATAATAGTGCTTCATTGAAGGAGGAGATTGTATCTTTACGTGCTAAAGTTGCTGTGTTGGAGGAAGACTTGCTTAAGGCGAAGCAAGAAATCTCTGAGCATAAGAACCTTTGTCCACAGATAGAAAAGGAACTGCGGGAACTCAAGGATCTTGAACAGCAAATGAAGCCTAAGAGAACAAAAATAATATCTGATTTGTTGATATCAGTTTCAAAAGCTGAGAGACAAGAAGCAAGGCTAAAAGTACGACAAGACTCATTGAGACTTGGAAATGTTGGTGTATCCAGAGCTGGAACTGTCTTAACTGAGAGCTGGGAAGATGGCCAGGAGTTAAAGGATATAGTTGCTCAGCTTAAACAACTAACGGACAAAAGGGAGGCAATTATGCGGCAGCGCAAGTTATTTAAAGAAAAACAATCTGATAAGGGTGATGGAATAAATGCAGAGGCTGGATTACTGGAAGATGTTCTCATTCAGGATGAAATATATAAGGCTCGACTAGCCAACATTAAACGAGAAGAAGAATCTATCTTGCGAGAGAAGGAACGCTACGACCTAGATAAGGGAAGGCTAATTCGTGAAATGAAACGCATACGGGATGAAGATGGTTCACGGTTCAACAGCTTTCAAATTCTACACCATCGCTATGCCCTTTTAAACCTTCTTGGAAAGGGAGGATTCAGCGAGGTGTACAAGGCTTTTGACTTGGTGGATCATAGATATGTTGCTTGCAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTACATCAGGCATGCAATTCGAGAGTATAATATTCACAAGACCTTGGTTCATCCTCACATTGTTCGCTTATGGGACATCTTTGAGATTGATCATAATACATTTTGCACTGTTCTAGAGTATTGTAGTGGGAAAGATCTCGACGCTGTTCTTAAAACAACATCTACATTGCCCGAGAAGGAAGCTAGGGTCATTTTAGTTCAGATTTTCCAGGGCCTTATATACATGAATAAAAGAACACTGAAAATTATCCATTATGATTTAAAGCCTGGAAATGTTTTGTTTGATGAGCTTGGTAGTGCCAAAGTGACTGACTTTGGTCTTAGCAAGATTATGGAGAATGATGTGGGATCCCAGGGTATGGAACTTACATCCCAGGGGGCTGGGACATATTGGTATTTACCTCCTGAATGCTTCGAGCTCAATAAGACACCTCTTATATCATCCAAGGTTGATGTATGGTCTGCTGGTGTTTTGTTTTATCAAATGCTCTTTGGTAGACGTCCTTTTGGACATGACCAATCACAGGAGAAAATACTTCGTGAAGACACAATTATTAATGCACGCAAGGTTGAATTTCCCTCTAAACCTACTGTTTCTAGTGAGGCAAAGGAATTCATTCGGCGATGTCTTACATATAATCAGAATGATAGACCAGATGTATTAACTCTTGCTCAGGATCCATATCTCACTTACTCAAAGAAACAGTGA 1998 0.4119 MSDDMLVHFASNSSNQSDQSLPTKMAKLEARMAGKASSAVSQQPGWPSVSSSAGKFGGPAEEIVKPSPSSSDSDDDNGGEFLIQANTRKRLKVQEDVNEALTDGRQTSLEAVETKNNIDANRKKSGRGRGGSGSGRGRGSKSNDHTRTQNSHPTSDASHKDGRLKDQFHSDNSASLKEEIVSLRAKVAVLEEDLLKAKQEISEHKNLCPQIEKELRELKDLEQQMKPKRTKIISDLLISVSKAERQEARLKVRQDSLRLGNVGVSRAGTVLTESWEDGQELKDIVAQLKQLTDKREAIMRQRKLFKEKQSDKGDGINAEAGLLEDVLIQDEIYKARLANIKREEESILREKERYDLDKGRLIREMKRIRDEDGSRFNSFQILHHRYALLNLLGKGGFSEVYKAFDLVDHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHPHIVRLWDIFEIDHNTFCTVLEYCSGKDLDAVLKTTSTLPEKEARVILVQIFQGLIYMNKRTLKIIHYDLKPGNVLFDELGSAKVTDFGLSKIMENDVGSQGMELTSQGAGTYWYLPPECFELNKTPLISSKVDVWSAGVLFYQMLFGRRPFGHDQSQEKILREDTIINARKVEFPSKPTVSSEAKEFIRRCLTYNQNDRPDVLTLAQDPYLTYSKKQ 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03084 665 Gene3D Transferase(Phosphotransferase) domain 1 377 665 - -
Vivi7g03084 665 MobiDBLite consensus disorder prediction 154 171 - -
Vivi7g03084 665 Coils Coil 173 231 - -
Vivi7g03084 665 FunFam Serine/threonine-protein kinase TOUSLED 377 664 - -
Vivi7g03084 665 MobiDBLite consensus disorder prediction 1 171 - -
Vivi7g03084 665 MobiDBLite consensus disorder prediction 1 23 - -
Vivi7g03084 665 SMART serkin_6 386 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03084 665 MobiDBLite consensus disorder prediction 100 115 - -
Vivi7g03084 665 ProSitePatterns Protein kinases ATP-binding region signature. 392 415 IPR017441 GO:0005524
Vivi7g03084 665 ProSiteProfiles Protein kinase domain profile. 386 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03084 665 Coils Coil 281 308 - -
Vivi7g03084 665 Pfam Protein kinase domain 387 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03084 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672|GO:0006468
Vivi7g03084 665 PANTHER MIXED LINEAGE PROTEIN KINASE 11 664 - -
Vivi7g03084 665 CDD STKc_TLK 385 658 - -
Vivi7g03084 665 SUPERFAMILY Protein kinase-like (PK-like) 378 660 IPR011009 -
Vivi7g03084 665 MobiDBLite consensus disorder prediction 36 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03084 Vivi-Chr7 95567556 95579539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03084 391 665 MAP Kinase Kinase Kinase AT1G09000 29.710 2.28e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Vivi7g03084 Pkinase 1.7e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03084 K08864 - gmx:100805168 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03084 7 95567556 95579539 Vivi7g03084 7 95567556 95579539 ECH