Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03081 ATGATTAATACCTGTTATAACTCTAGATTTATCAAGTTCTTGTTCTTCATTATTTCTTCCTTGCATGCTGCTTCTGCTCTTACCTCTGATGGCTTCACTCTCTTGTCACTCTTGAGAACCTGGACCTTTGTTCCACCTCTAGTCAACTCTACCTGGAGAGCTTCTGATTCCAATCCATGCTCATGGCTTGGTGTTCAATGCGACCGTAACAACCATGTGGTTTCCCTTAACCTCACTAGTCATGGTATTTTTGGTCAACTTGGACCACAAATTGGAAACCTTTATCACTTGCATACCCTTTTGTTGTTGGATAATGGTTTCTCAGGAAAAGTGCCTTCAGAGCTAAGCAACTGTAGTTTTCTTGAGAATTTAGACCTTTCTAGGAACAAATTCACTGGAAGTATACCATATAGTTTGAATCAGTTGCAAAATTTACGGTTTTTGAGCTTGTCTTCCAATCTGCTGACTGGTGAAATTCCAGATTCTTTGTTTGAAATTCAATCTCTAGAAGAAGTGAGCTTTCACAGTAACCTTCTTAGTGGACTTATTCCAACTAATATTGGAAACTTGACTCAAATATTGAGGTTGTATCTATATGGTAATCAATTGTCAGAGACTATTCCTTCATCCATTGGTAATTGCAGTAAATTGCAGGACCTTGATTTATCTTTCAATCGTTTGAGAGGCGAAATTCCGGTGAGTATTTGGAGAATTCAAACTCTGAGGAGGTTGATTCTCAATGAAAATAATTTCAATGAGTCTCTTACTGATTTTGAAAGTAATCTGAACCTGAATTACATGGACATGAGCAAGAACAATATTAGTGGACTGATTCCAGCAAGTTTGGGAAATTGCGTAAATGTCACATACATTAATTTGTCATGGAACAAGCTTGGAGGGCCAATACCATCAGACCTTGGAAGCCTTGTGAATCTTGTGACTTTGAATCTTGCTCATAATAACTTGGAAGGTCCTTTGCCACTTCGCCTGTCGAATTGTACTAAAATGGATCGTTTTGACATCGGATTCAATTTCCTAAATGGTTCAATCCCGTCGAGTTTGAGAAGTTGGAGAGGCTTATCCACATTGATTTTAAGAGAAAATCATTTCACAGGAGGTATCCCACAGTTTTTGGCAGAATTTAGCAACCTGCGAGAGCTACAACTTGGCGGAAATAATTTTGGAGGCGAAATTCCTCGATCAATGGGAGCATTGCACAATTTGTTCTACGGATTGAATCTGAGTGCTAATGGATTGACAGGAGGGATTCCTGCAGAAATCGCGAAGCTACAACTGCTGCAAAGTCTGGACATATCTTTCAACAATTTAACAGGAAGCATAAATGTTCTTGAAGGTCTTGTTTCGTTAACTGCGATCAATATTTCTTACAATCTCCTCAATGGTTCTGTACCAACTGGCCTTAATAATATAGTAATGAAGTTATTGAAATCCTCGCCATCATCGTTCATGGGTAATCCTCTCCTATGTGTCAGTTGTTTGAGTTGCATTAACTCTAGTTATGTGAATCCTTGTTTCTACAAATCAAATGATCACAAAGGTATCAGTAATGTTGGAATTGTGATGATAGCACTTGGATCCTCAATTCTGATTTCTTCTGTACTGGTAATGATAATTCGACGGTGTCTTCTTAGAAAGAATTCAGATATGGAGTCCGATCTAAATCAATGGTATTATATTGATAGAGGAGCTGGAAGGATTGGAGTCGGATATGCTGACGAATTCAACATCTCAGGTAAAGAACCGTCATCCGCCCTTAGGAATCTAGTGCTGCAGGCTACAGATAACCTAAGTGATGAGTATATTATCGGCAGAGGGGCACATGGTATCGTGTACAAAGCAATTCTTGGTGACCAGGTTTTTGCTGTAAAGCAATTTGAATTCGCAAGGAACAGGAGAAAACAGCTACGTATGATGTGCAAAGAAATTGAAGTGCTTGGAATGTATAAGCATCGCAACTTGATCAAATATGCAGACTACTGGATTGGTGAGGAATATGGCTTAGTCTTGTATAAATTCATGGAGAACGGTAGTCTTCATGATATCTTGCATGAAAAGAATCCCCCGCCGCCTTTAACGTGGAACGCCAGGTTTAACTTAGCTGTTGGAATTGCCGAAGGAATTGCATATCTGCATAATAATTGTGATCCACCCATAGTGCACCGAGATATTAAACCGAAGAATATTCTTATTGATGAGAATATGGATCCAATTATAGCTGATTTTGGTACTGCCCTGTACAGGAAGTCATCCGAAGATTCTTATAGTCATTCAGAAACGAGGAAAATGCTTTCGACAAAAGTTATTGGTACCCCTGGCTACATTGCACCAGAGAATGCATATCAAGTAGTGCAGGGAAGAAAATCTGATGTATATAGCTACGGCGTTGTTTTGCTCGAGCTAATAACCAGAAAGAAAGTGTTAGTTCCCTCTTTGAATGATGAGAGAAAAGTGACCCCTTTAGTGAGCTGGGCTAGAACAGTTTGGTTGGAAACAGGCAAAATTGAGGATGTTGCTGATTCATACCTTGCGAGTTCACTTCTGGATTCAGCAGCAGTGACCAAGCAAGTCACTACCATATTTTTATTGGCATTGCAATGCACAGAGAAGGATCTACGAAAGAGACCAATCATGAAAGATATTCTTGGCTTGTATAGAAAGGATATGTTCAAGCGGTGTGATGAGGAGGAACAGGGTGATGTGGTTGCAGCTGATACATCACTGCAGCCATGTAGTCCTAATATTCTCCCTAACATTCCAGTTGTTAGTGTTGAGAACCATCTACAGGGAGAAAGCAGTAGGGATGCAGCGAAAAGACAAAGAGAAGTTCCAATCAATGCGGAGACTGAACCTAAGGATTACAATGACTTAAGCTTTTGGCCGGACACTGATAAATTTCAAATGGGATTCCGTGTTGAAGAAAATTGGAGTCTCAAGCCTACGATTTATATTGATGGACTGTTAGTTAAAATGACGGGAAATGGTAAGATATTGACTGAACAGGTTTTGGTGGTAGCTGCTCTGAATGTTCCAAAAGTAACCTATGTGTGGCCTAGTTTGATTTTCATTCCCTCTGTCGCTGGTCCGATAGTAACCAAACCTTTCAATTGGTTTTTCCTCTCGCGCTGGGGCCAGTATATGTACCTTAATAAATCCTTGTATTATCAACCCAAATCATACTTCATAAATGCCAACAAAACCAATACCCTTCAGGACCTGATATTGAAGGCTACCGAGAACCTAAATGATCAGTATGTCGTTAGCAGAGAAGCACATTGTACTGTGTACAAAGTCATACTTGGTCAACAAGTTTTTGCTTTAAAGAAGTTTGAATTTGGAAGGAACAAGAAAATGCACCAAAGTATCGTCAGCAATGAAATTGAAGTCCTTGACGACATCGAGATGATTGTTGACTCACACCTTGCTAGTTCATTTCCCAATTCAGCAACACTGACCAAGCAAGTCGCGCCAATCTTTTTATTGGTATTGCAATGCACAGAGACAGATCTTCAAAAGAGACTGACCATAAAAAATGCCGTTACAACACTACAACCATTTATCCCTTGTAACCTCTTTTCTGATGGTTCAGATGTTAGTGCTGACAACCATCTGTCAATAAGGAATACTTATTGCAGTGATTTTGTTATAACTATATTTGATGTTAGTTGCTGA 3690 0.3946 MINTCYNSRFIKFLFFIISSLHAASALTSDGFTLLSLLRTWTFVPPLVNSTWRASDSNPCSWLGVQCDRNNHVVSLNLTSHGIFGQLGPQIGNLYHLHTLLLLDNGFSGKVPSELSNCSFLENLDLSRNKFTGSIPYSLNQLQNLRFLSLSSNLLTGEIPDSLFEIQSLEEVSFHSNLLSGLIPTNIGNLTQILRLYLYGNQLSETIPSSIGNCSKLQDLDLSFNRLRGEIPVSIWRIQTLRRLILNENNFNESLTDFESNLNLNYMDMSKNNISGLIPASLGNCVNVTYINLSWNKLGGPIPSDLGSLVNLVTLNLAHNNLEGPLPLRLSNCTKMDRFDIGFNFLNGSIPSSLRSWRGLSTLILRENHFTGGIPQFLAEFSNLRELQLGGNNFGGEIPRSMGALHNLFYGLNLSANGLTGGIPAEIAKLQLLQSLDISFNNLTGSINVLEGLVSLTAINISYNLLNGSVPTGLNNIVMKLLKSSPSSFMGNPLLCVSCLSCINSSYVNPCFYKSNDHKGISNVGIVMIALGSSILISSVLVMIIRRCLLRKNSDMESDLNQWYYIDRGAGRIGVGYADEFNISGKEPSSALRNLVLQATDNLSDEYIIGRGAHGIVYKAILGDQVFAVKQFEFARNRRKQLRMMCKEIEVLGMYKHRNLIKYADYWIGEEYGLVLYKFMENGSLHDILHEKNPPPPLTWNARFNLAVGIAEGIAYLHNNCDPPIVHRDIKPKNILIDENMDPIIADFGTALYRKSSEDSYSHSETRKMLSTKVIGTPGYIAPENAYQVVQGRKSDVYSYGVVLLELITRKKVLVPSLNDERKVTPLVSWARTVWLETGKIEDVADSYLASSLLDSAAVTKQVTTIFLLALQCTEKDLRKRPIMKDILGLYRKDMFKRCDEEEQGDVVAADTSLQPCSPNILPNIPVVSVENHLQGESSRDAAKRQREVPINAETEPKDYNDLSFWPDTDKFQMGFRVEENWSLKPTIYIDGLLVKMTGNGKILTEQVLVVAALNVPKVTYVWPSLIFIPSVAGPIVTKPFNWFFLSRWGQYMYLNKSLYYQPKSYFINANKTNTLQDLILKATENLNDQYVVSREAHCTVYKVILGQQVFALKKFEFGRNKKMHQSIVSNEIEVLDDIEMIVDSHLASSFPNSATLTKQVAPIFLLVLQCTETDLQKRLTIKNAVTTLQPFIPCNLFSDGSDVSADNHLSIRNTYCSDFVITIFDVSC 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03081 1229 SUPERFAMILY Protein kinase-like (PK-like) 593 889 IPR011009 -
Vivi7g03081 1229 ProSiteProfiles Protein kinase domain profile. 603 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03081 1229 SUPERFAMILY L domain-like 31 285 - -
Vivi7g03081 1229 Gene3D Ribonuclease Inhibitor 266 503 IPR032675 -
Vivi7g03081 1229 Gene3D Ribonuclease Inhibitor 189 265 IPR032675 -
Vivi7g03081 1229 SUPERFAMILY L domain-like 258 496 - -
Vivi7g03081 1229 SMART LRR_typ_2 430 452 IPR003591 -
Vivi7g03081 1229 SMART LRR_typ_2 142 166 IPR003591 -
Vivi7g03081 1229 SMART LRR_typ_2 381 405 IPR003591 -
Vivi7g03081 1229 SMART LRR_typ_2 309 333 IPR003591 -
Vivi7g03081 1229 SMART LRR_typ_2 190 214 IPR003591 -
Vivi7g03081 1229 FunFam Leucine-rich repeat receptor-like protein kinase 30 185 - -
Vivi7g03081 1229 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 680 899 - -
Vivi7g03081 1229 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 241 506 - -
Vivi7g03081 1229 Gene3D Transferase(Phosphotransferase) domain 1 680 911 - -
Vivi7g03081 1229 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 142 887 - -
Vivi7g03081 1229 SMART serkin_6 603 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03081 1229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 725 737 IPR008271 GO:0004672|GO:0006468
Vivi7g03081 1229 Gene3D Ribonuclease Inhibitor 32 186 IPR032675 -
Vivi7g03081 1229 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Vivi7g03081 1229 Gene3D Phosphorylase Kinase; domain 1 586 679 - -
Vivi7g03081 1229 Pfam Protein kinase domain 606 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03081 1229 ProSitePatterns Protein kinases ATP-binding region signature. 609 630 IPR017441 GO:0005524
Vivi7g03081 1229 Pfam Leucine Rich repeat 213 230 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03081 Vivi-Chr7 95529630 95533573 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03081 76 902 Receptor kinase-like Gene Family AT1G73080 43.452 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi7g03081 Pkinase 5.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03081 - - tpra:123924637 1451.42