Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03050 ATGGATGTTCATGTGATACCTATTGGAGAAGGAAGTGGTGATCGAGGTATGGAGAATGGCGGGGATGGTGAAATTGGTGAAGTTAATAATGTTGGAAACTCTGGGTCACATGGTGAGGGTATGGTTTTTGAGCCGTATTTGGGTATGGAATTTGATTCTGAGGACTCTGCGAAAACTTTTTATAGTGAGTATGCTAGACGGTCGGGTTTTAGTTCCAGAGCTGGGTTGCATGGTCAGTTTAATGCGGATGGGACGAATATGTTTAGGGAGTTTGTGTGTAGCAGGGAGGGTTTGAAAAGGAAGATGACTGAAAGTTGTGAGGCGATGATTAGGATAGAGCAAAAGGGTCAAAATAAGTGGGTTGTTACGAAGTTTGTGAAGGAACATAGTCATTCTACGGCGGTAACTGATAAGGTGGAAAAACTTCGACCACTGAAGCATTTCTCTAGTGTTGGAAGAACCATGCCTGAAACTTACAAAGGAGTGGGGCTTGTTCCCACTGGTGTCATGTATATATCTATTGATGGGAATCATGTTTCCTCCAAGAATAGTCACAAGAGTAGGAATTATCCTGCTGGTGCTGCTGCCAAAACAAGTCATCCAGCTAAAAATTCCCCATTGAAGAGTTATACTGTGAGGCAACCTATTCAAAAGAAGACATTAGGGAGGGATGCTCAGAGCCTGCTGGAGTATTTTAAGAAAGTGCAGGCTGAAAACCCTGGTTTCTTCTATGCAATACAACTTGATGAAGATAATCGTGTGTCTAATGTGTTTTGGGCAGATGCAAGATCAAGGACGGCTTACAGTCATTTTGGTGATGCAGTTACTCTGGACACAACACATAGAGCGAATCAATATAATGTGCCATTTGCTCCATTCACTGGGATTAACCATCATGGTCAGATGATTTTGTTTGGTTGTGCACTCATTTTTGATGATTCCGAGGCTTCTTTTGGTTGGCTCTTCAAGACATTTCTAGCCGCTATGAACGACCGTCACCCTCTCTCTATAACTACCGATCAGGACAGATCCATACAAACGGCAGTTTCACAAGTTTTCCGCCAAGCACGTCACTGTATAAATAAGCGGTATGTCTTGCGAGAAGGCCACGAAAAGTTGGGCCATCTATGTCGCATGCATCCACATTTTCATTTTGAACTTTATAATTGTATTAATCTGACAGAAACGATTGAGGAGTTTGAATTTTCTTGGAATTCTATCATGGACAAATATGGACTCAGAGGGCATGATTGGCTTCAGTCCTTGTATAGTGCTCGTGATCAATGGGTACCAGCATATTTCCGTGATTCATTTTTCGCTGTATTATCTCCTAATCAAGGATTTGATGGTTCTTTTTTTGACGGTTTTGTAAACCAGCATACAACATTACCAATGTTCTTTAGGCAGTATGAACTAGCTTTGGAGAGGTGGTTTGAAAAGGAAATAGAATCAGATTTTGAGACACTTAGTGCGACACCAGTTCTAAAGACACCTTCCCCAATGGAGAATCAAGTTGCTAAGCTTTATACACGGAAAATATTTTTGAAGTTTCAAGAAGAGCTAGTTGAAACTTTTGCTTATACTGCCAACAGAATCGAAGAGGATGGGGCAAATAGCATATTTAGAGTTGCAAAATTTGATGATGTCCATAAGTCGTATACTGTCACATTAAACCATTCCGAGTTGAAAGCTAACTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTTTGCAGGCATGTTTTAACTGTTTTCACTGTGTCTAATGTATTCACCATACCATCCCACTACATCTTAAAACGGTGGACAAGGGATGCAAAAAGCAGTGTTGTATTGGATGAATGTGGTGGTGAATTACATGCACATGAATCTTTGACATCACGGTATACCAATCTATGCCGGGAAGCCATCCAATATGCTGAGGAAGGGGCTGTAGCAATGGAAACTTATGATGCTGCAATGGGTGCTCTTAGAGAAGGTGGAAAGAAAATTGCTGTCATGAAGAGGAATATTGCCAAAGTTTCACCAACTAATCATCGAGTCAGTGAGAATGCTTGCACTGACAAGAAAACCCATATTTCAACATCAGATACAAGAACAACCCCTATTTTATGGCCACTAAACGGTGAAACAACAAGGTTTAATCTTAACGATGCCGGTACTCCTGTTCAACCAGTTGCTGATCTGAATTTACCTCAAATAACCTCAACACCACATAAGCGAGTTGATGTTCCACCCACAGTGCATCGTCAGCGAGTTGATGGTCCATCCCCAGGGCCTCGTCAGAGAGTTGATGGTCCACGGCCAGTGCCTCGTAGGCGAGTTGATGGTCCACCCCCGATGTCTAGTCAGCGAGATGATCATCCACCTCCTCTGCTTCTTCAGCAAGATGATGGTCCACCTGAAAACAAGGTGGTTCTTCCATGTCTGAAGTCAATGACATGGGTAATGGAGAACAAAACCTCAACCCCAGAGAACAAAGTAGCTGTTATCAATCTCAAGTTGCAAGATTACAGCAAGGGTCCATCAGCAGAATATGAAGTTAAGTTCCATCTCTCTCGAGGTACTGTGGGACCTGTTTTGAAGTCTATGGCTGAAGTCAGCGAACAACTTTCAACAACAGCTAATAAGGTTGCTGTAGTAAATCTAAAGCTTGAGGATGCCCAGGCTTCTGGTGAGTCTGAAGTTAAGTTTCAAGTGTCCAGAGATGCATTGGGTGCTGTACTGCGATCAATGTCTTATATCCGCGAGCAACTTTCTTGCGCTGGATCAGAACCTATGTCAAAAAAGCATAGAACCTGA 2802 0.4233 MDVHVIPIGEGSGDRGMENGGDGEIGEVNNVGNSGSHGEGMVFEPYLGMEFDSEDSAKTFYSEYARRSGFSSRAGLHGQFNADGTNMFREFVCSREGLKRKMTESCEAMIRIEQKGQNKWVVTKFVKEHSHSTAVTDKVEKLRPLKHFSSVGRTMPETYKGVGLVPTGVMYISIDGNHVSSKNSHKSRNYPAGAAAKTSHPAKNSPLKSYTVRQPIQKKTLGRDAQSLLEYFKKVQAENPGFFYAIQLDEDNRVSNVFWADARSRTAYSHFGDAVTLDTTHRANQYNVPFAPFTGINHHGQMILFGCALIFDDSEASFGWLFKTFLAAMNDRHPLSITTDQDRSIQTAVSQVFRQARHCINKRYVLREGHEKLGHLCRMHPHFHFELYNCINLTETIEEFEFSWNSIMDKYGLRGHDWLQSLYSARDQWVPAYFRDSFFAVLSPNQGFDGSFFDGFVNQHTTLPMFFRQYELALERWFEKEIESDFETLSATPVLKTPSPMENQVAKLYTRKIFLKFQEELVETFAYTANRIEEDGANSIFRVAKFDDVHKSYTVTLNHSELKANCSCQMFEYSGILCRHVLTVFTVSNVFTIPSHYILKRWTRDAKSSVVLDECGGELHAHESLTSRYTNLCREAIQYAEEGAVAMETYDAAMGALREGGKKIAVMKRNIAKVSPTNHRVSENACTDKKTHISTSDTRTTPILWPLNGETTRFNLNDAGTPVQPVADLNLPQITSTPHKRVDVPPTVHRQRVDGPSPGPRQRVDGPRPVPRRRVDGPPPMSSQRDDHPPPLLLQQDDGPPENKVVLPCLKSMTWVMENKTSTPENKVAVINLKLQDYSKGPSAEYEVKFHLSRGTVGPVLKSMAEVSEQLSTTANKVAVVNLKLEDAQASGESEVKFQVSRDALGAVLRSMSYIREQLSCAGSEPMSKKHRT 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03050 933 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 665 IPR031052 GO:0006355
Vivi7g03050 933 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
Vivi7g03050 933 Pfam MULE transposase domain 275 360 IPR018289 -
Vivi7g03050 933 Pfam FAR1 DNA-binding domain 59 132 IPR004330 -
Vivi7g03050 933 SMART 26again6 564 591 IPR006564 GO:0008270
Vivi7g03050 933 MobiDBLite consensus disorder prediction 182 209 - -
Vivi7g03050 933 Pfam SWIM zinc finger 553 586 IPR007527 GO:0008270
Vivi7g03050 933 MobiDBLite consensus disorder prediction 730 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03050 Vivi-Chr7 95253102 95258434 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi7g03050 MULE 2.7e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03050 - - gmx:100786516 1226.85