Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03045 ATGGAAGCTAATAAACCAGTAACAACATCTACTGAACAACCACAACCCATACGATGTAAAGCGGCGGTTTGTCGCAAACCAGGCGAGCCATTGATTATCGAAGAGATCGTCGTGGCTCCACCAATGCCACGCGAAGCTCGGATTCGTATCATATGCACTTCTCTTTGTCACAGCGATATTACTTTTTGGAAAATGCAGGAACCTCCTGCAATATTTCCAAGGATTTTTGGTCATGAAGCAATTGGGGTTGTGGAAAGTGTTGGAGAGGAAGTAACAGAAATTACAAAAGGAGACATTGTTATTCCAATCTTCATTGCTGATTGTGAAGAGTGTACAGATTGCAAATCAACAAAGAGTAACCTTTGTTCAAACTTTCCTTTCAAAATTTCACCTTGGATGCCTAGATATGCTAACACAACAAGATTCACTGATCTAAATGGAGAGAGTATACACCATTTCATGTTCGTCTCTAGTTTTAGTGAGTACACTGTTGTTGACATTGCCAATTTACTCAAGATTGATCCAGCAATTCCTCCTAATAGGGCTTGCCTCCTTAGTTGCGGTGTATCAACAGGAGTAGGAGCTGCTTGGAAAACAGCAAATGTGGAGCCAGGTTCTACAGTAGCTATTTTTGGACTTGGATGTATTGGATTAGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACAAGGATTATAGGCGTGGATATCAAACCAGAAAAATTTGACATTGGGAAGAAGTTTGGAGTCACAGAGTTTATAAATTCAAGAGAATGTGAAAACAAATCTGTGAGTCAAATTATCATAGAGATGACTGGTGGTGGAGCAGATTATTGCTTTGAATGTGTTGGTATGGCATCATTGGTGCAAGAAGCATATGCTTCATGTAGAAAGGGTTGGGGGAAAACAATTGTATTAGGAGTGGACAGGCCAGAATCCATGTTGAGCCTTAATTGTAATGGGGTCCTTGTTCAAGGGAAGACTCTCATGGGATCCTTATATGGAGGACTCAAACCTAAGACTGATGTACCTATTCTTCTTAAACGCTACATGGACAAGGAACTGAAGTTGGATGAGTTTGTGACACATGAGGTGGAGTTTAAAGACATCAACAAAGCTTTTGATTTATTGGTTAATGGAGAGTCTCTTAGATGTGTGATTTGGATGGACAAATGA 1176 0.4056 MEANKPVTTSTEQPQPIRCKAAVCRKPGEPLIIEEIVVAPPMPREARIRIICTSLCHSDITFWKMQEPPAIFPRIFGHEAIGVVESVGEEVTEITKGDIVIPIFIADCEECTDCKSTKSNLCSNFPFKISPWMPRYANTTRFTDLNGESIHHFMFVSSFSEYTVVDIANLLKIDPAIPPNRACLLSCGVSTGVGAAWKTANVEPGSTVAIFGLGCIGLAVAEGARLCGATRIIGVDIKPEKFDIGKKFGVTEFINSRECENKSVSQIIIEMTGGGADYCFECVGMASLVQEAYASCRKGWGKTIVLGVDRPESMLSLNCNGVLVQGKTLMGSLYGGLKPKTDVPILLKRYMDKELKLDEFVTHEVEFKDINKAFDLLVNGESLRCVIWMDK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03045 391 Gene3D - 22 384 - -
Vivi7g03045 391 Gene3D - 192 332 - -
Vivi7g03045 391 Pfam Alcohol dehydrogenase GroES-like domain 44 172 IPR013154 -
Vivi7g03045 391 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 77 91 IPR002328 GO:0008270|GO:0016491
Vivi7g03045 391 PANTHER ALCOHOL DEHYDROGENASE 15 387 - -
Vivi7g03045 391 FunFam S-(hydroxymethyl)glutathione dehydrogenase 192 332 - -
Vivi7g03045 391 SUPERFAMILY GroES-like 340 388 IPR011032 -
Vivi7g03045 391 Pfam Zinc-binding dehydrogenase 216 339 IPR013149 -
Vivi7g03045 391 FunFam Alcohol dehydrogenase 6 22 204 - -
Vivi7g03045 391 SUPERFAMILY GroES-like 13 200 IPR011032 -
Vivi7g03045 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 177 352 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03045 Vivi-Chr7 95204418 95206964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03045 44 338 Monolignol Biosynthesis Gene Families AT4G37990 24.497 5.05e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03045 K00121 - gmx:100806887 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03045 7 95204418 95206964 Vivi7g03045 7 95204418 95206964 ECH
Vivi3g03825 3 65667371 65671317 Vivi7g03045 7 95204418 95206964 PCT