Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03032 ATGCAGGCTATTATCTGGTTGATGCTGTTGTTGATGGTGAAAATTGTATTGGGAAATTCAGATACTGATGCACTTCTTGAACTCAAGAAGGGTATTCAAACTGACCCTTTTGGATTAGTTCTTAATTCTTGGGATTCCAAGTCATTAGACTCTAATGGATGTCCTCAAAACTGGCATGGAGTATTATGTATTGAAGGAAATGTTATATCTATCTCTCTTGACAATGCCGGTTTGGTTGGCGAGTTTAATTTCGTTGCGGTTAGTACTCTTCCCATGCTTTGTAATTTGACAGTTGTAAACAATAGTTTCACTGGAAGTATGTCACGAATCCGTCCGATGAAGTCGCTTAAGTTTCTCAATTTGTCTCTCAACAAGTTCACCGGCTCGTTACCTTCTATATTAGTCGAGTCGCGTAGTTTAGTGTATCTGAATCTCTCTTCGAATGGATTTAGCGGCGTTATCCCGAACGTGTTTCACAAACTTGAGGAGTTGAAGTATTTAGATATTCGCAGTAATAACTTTTCGGGTGATGTTATACATGTATTTGATCAGATGGGAAGTGTGTTACATGTTGACTTGAGCAACAACAGGTTTTCTGGTGCATTGGATTTAGGACTTGGAGATGTTTCGTTTCTATTCTCGATTCAGTATTTAAATGCGAGCCATAATTCGTTGACGGGTGAACTGTTTGCTCATGATGGTATGCCGTATCTTGATAATTTAGAGGTGTTTGATGCTAGTAATAACCAGATAGTTGGTAATATACCTTCCTTCGCATTTGTTGTGTCGCTAAGGATTCTTCGGCTCGAATGTAATCAGTTGACAGGTTCATTGCCAGAAACTTTGTTGAAGGAAAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTTCCATTGGAAGCATTACTTCATTGACTCTAAGGAAGCTTAACCTATCTTCAAACAAATTATCAGGCTCATTACCTTTCAAAGTAGGACACTGTGCCGTCGTCGATTTGAGCAACAACATGTTTTCAGGTAATTTGTCAAGGATCAAGTATTGGGGAAACTATGTAGAAGTTATTCAACTAAGTTCAAACTCGTTATCCGGAACACTTCCAAATGAAACTTCTCAGTTTTTAAGGTTAACTTCACTTAAGGTATCCAATAACTCATTGGAAGGTTTTCTGCCACCAGTATTAGGAACATTTCCAGAACTAAAAGAGATTGATCTGAGTCTCAATCGGCTTTCTGGATCCCTCCTACCGAACCTTTTCGCCTCGACGAAATTGACTACTCTTAATCTCTCAAACAACAACTTTTCTGGACCGATTCCTCTTCAACTTCCAAATAGTCCATTGGTTTCTTCCGAAAAATTTAGTCTGACGTCGCTTGATCTTTCGAACAATAACTTGAATGGCATTCTTTCTCCGAAAATTAAGGAGCTTCATAATTTAGAATATCTTAACATATGTAACAACAAATTGGAAGGTGCTATTCCTAATGATCTTCCAGATGACTTAAGAGGATTCAATGCGTCATTGAATAATTTTTCTGGTGTTGTACCTGATAAATTATCGCAGTTTCCTGAATCAGCATTTCGTCCAGGAAATCCTATGCTGATATTTCCGAATTCTCCGTTATCGCCAAAAGATAGTTCAAATTCCATCTTAGGTTTGAGGTCACATAAGAAGGTTTTCACTAGGAGTGTCTTGATTACATGTTTAGTTACTGGTGCTTTTGTGATGGCTATTATGGCTGCAACGATTTTTTATAGGATTCGTCGGAAAAAAGAAATGGCTTCTAAACAAGACGCGACCGCAAGTGACATTGTCCCAGAGAGTACTTCTCCATCAAAGAGAAGAAATTTGGAATCTTTGCCGCATTCTCAGAGTGATGATACCGAAAACATTCATCCAACTGTAAAGAAGCCTAAGAATGAGGAAGGAATGTCTTCGCCAGTGTCTATTTTATCTGCTTCAAATCCTTCACCTTCTACAAGCCGTCAGTTTGAGAATCCTAGTTCGCTCAATGTATCATCACCGGATAAACTGGTCGGGGACTTACATCTATTCGATGGATCGTTGATGTTAACTGCAGAAGAACTTTCGTGTGCTCCGGCTGAAGTTATCGGTAGGAGTTGTCATGGAACACTCTACAAAGCTACACTTGAATCTGGTCATGTTTTGGCTGTCAAATGGTTAAGAGAAGGAATAACCAAAGGCAAAAAGGAGATGGCTAGAGAAATCAAGAAACTCGGGACAATCAAGCATCCGAGTTTGGTTTCTTTTCTCGGTTGCTACCTCGGGCCAAAGGAGCATGAGAGACTGATTATATCAAATTTCATGAATGCACATTCTTTGGACATTTATTTGCATGAGGCTGATAGAAGAAATCTCAATCCTTTGTCTCTTGACGAAAGGCTCAGGGTGGCCGTAGAAGTGGCGCGGTGTCTACTTTACTTACACACCGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATTCTACTAGAAACTCCAAACAGAAATGCCTTGCTCACTGACTACACCCTGCATCGAATACTCACCGCAGCTGGTACTTCCGAGCAAGTTCTGAATGCAGGTGCGCTTGGTTACCGTCCGCCCGAGTTCGCTAGATCAACCAAACCAAGCCCGTCCTTAAAGAGTGACGTCTACGCATTCGGAGTCGTCTTGTTAGAGCTCCTAACAGGAAGAAAATCAGGAGAAATCGTGTCGGGGATTCCTGGCGTGGTTGAACTTACCGAATGGGTGAGGTTCTTAGTCGAACGAGATCGGTCTAACCAATGCATTGATAAGTCCCTTGCAGAAGGATCATCTATGATTCTTGATGAAATGCTAAAAGTGGCTCTAAGATGCATTCTTCCAGCATCTGAAAGGCCTGACATGAAAACAGTCTTTGAAGATCTTTCAACAATAAGAGAGAGTTGA 2952 0.4048 MQAIIWLMLLLMVKIVLGNSDTDALLELKKGIQTDPFGLVLNSWDSKSLDSNGCPQNWHGVLCIEGNVISISLDNAGLVGEFNFVAVSTLPMLCNLTVVNNSFTGSMSRIRPMKSLKFLNLSLNKFTGSLPSILVESRSLVYLNLSSNGFSGVIPNVFHKLEELKYLDIRSNNFSGDVIHVFDQMGSVLHVDLSNNRFSGALDLGLGDVSFLFSIQYLNASHNSLTGELFAHDGMPYLDNLEVFDASNNQIVGNIPSFAFVVSLRILRLECNQLTGSLPETLLKESSMMLSELDLSQNKLEGSIGSITSLTLRKLNLSSNKLSGSLPFKVGHCAVVDLSNNMFSGNLSRIKYWGNYVEVIQLSSNSLSGTLPNETSQFLRLTSLKVSNNSLEGFLPPVLGTFPELKEIDLSLNRLSGSLLPNLFASTKLTTLNLSNNNFSGPIPLQLPNSPLVSSEKFSLTSLDLSNNNLNGILSPKIKELHNLEYLNICNNKLEGAIPNDLPDDLRGFNASLNNFSGVVPDKLSQFPESAFRPGNPMLIFPNSPLSPKDSSNSILGLRSHKKVFTRSVLITCLVTGAFVMAIMAATIFYRIRRKKEMASKQDATASDIVPESTSPSKRRNLESLPHSQSDDTENIHPTVKKPKNEEGMSSPVSILSASNPSPSTSRQFENPSSLNVSSPDKLVGDLHLFDGSLMLTAEELSCAPAEVIGRSCHGTLYKATLESGHVLAVKWLREGITKGKKEMAREIKKLGTIKHPSLVSFLGCYLGPKEHERLIISNFMNAHSLDIYLHEADRRNLNPLSLDERLRVAVEVARCLLYLHTEKAIPHGNLKSTNILLETPNRNALLTDYTLHRILTAAGTSEQVLNAGALGYRPPEFARSTKPSPSLKSDVYAFGVVLLELLTGRKSGEIVSGIPGVVELTEWVRFLVERDRSNQCIDKSLAEGSSMILDEMLKVALRCILPASERPDMKTVFEDLSTIRES 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03032 983 ProSiteProfiles Leucine-rich repeat profile. 289 311 IPR001611 GO:0005515
Vivi7g03032 983 ProSiteProfiles Protein kinase domain profile. 703 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03032 983 FunFam Leucine-rich repeat receptor-like protein kinase 688 780 - -
Vivi7g03032 983 Pfam Leucine rich repeat N-terminal domain 19 63 IPR013210 -
Vivi7g03032 983 Pfam Leucine rich repeat 138 198 IPR001611 GO:0005515
Vivi7g03032 983 Gene3D Transferase(Phosphotransferase) domain 1 781 983 - -
Vivi7g03032 983 SUPERFAMILY L domain-like 41 345 - -
Vivi7g03032 983 Gene3D Ribonuclease Inhibitor 183 356 IPR032675 -
Vivi7g03032 983 SUPERFAMILY L domain-like 335 527 - -
Vivi7g03032 983 Gene3D Ribonuclease Inhibitor 451 543 IPR032675 -
Vivi7g03032 983 FunFam Nuclear pore complex protein NUP107 18 180 - -
Vivi7g03032 983 Pfam Leucine Rich repeat 426 441 IPR001611 GO:0005515
Vivi7g03032 983 MobiDBLite consensus disorder prediction 650 677 - -
Vivi7g03032 983 Gene3D Ribonuclease Inhibitor 18 182 IPR032675 -
Vivi7g03032 983 Gene3D Phosphorylase Kinase; domain 1 701 780 - -
Vivi7g03032 983 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 212 456 - -
Vivi7g03032 983 Pfam Protein tyrosine and serine/threonine kinase 707 915 IPR001245 GO:0004672|GO:0006468
Vivi7g03032 983 SUPERFAMILY Protein kinase-like (PK-like) 706 977 IPR011009 -
Vivi7g03032 983 Gene3D Ribonuclease Inhibitor 357 450 IPR032675 -
Vivi7g03032 983 PANTHER OS07G0626500 PROTEIN 6 101 - -
Vivi7g03032 983 MobiDBLite consensus disorder prediction 600 677 - -
Vivi7g03032 983 MobiDBLite consensus disorder prediction 606 633 - -
Vivi7g03032 983 PRINTS Leucine-rich repeat signature 460 473 - -
Vivi7g03032 983 PRINTS Leucine-rich repeat signature 481 494 - -
Vivi7g03032 983 Pfam Leucine Rich Repeat 459 480 IPR001611 GO:0005515
Vivi7g03032 983 Pfam Leucine Rich Repeat 483 502 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03032 Vivi-Chr7 95120043 95128579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03032 5 980 Receptor kinase-like Gene Family AT3G28040 30.084 1.75e-76 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi7g03032 PK_Tyr_Ser-Thr 8.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03032 - - psat:127117920 1690.63