Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03025 ATGGCTTCACATGACAATGAGGAATGTTTGCCCCCACCACCTTCCATTGTTCCATCTCATGTTAAACCCCTCAAAATAGAACCAGAGCTGGTTAAGAACAAGGATCCTCCTAGGGTTCCTATAGCGAGGCGTGAACTGGGATCGAAGGGTCGTGCATTGACTTTGCTGACCAATCACTTTAAAGTGGAAGTTGCCAACACTGATGGATATTTCTACCAGTACAGTGTTGCTCTTTTTTATGAAGATGGACGTCCTGTTGAGGCGAAGGGTTCTGGTAGAAAGATACTGGACCGAGTTCAAGAAACTTATAAGTCTGAGCTGAATGGTAAAGACCTTGCGTACGATGGTGAAAAAACATTGTTCACTATGGGATCTCTAGCTCAGAACAAGCTTGAGTTTACTGTTGTTCTTGAAGACGTAACGTCTAGCAGGAATACTCGTAACTTGAGCCCGGATGCGTGTGGAAGTTCTAATGATGTTGATAGGAAGAGGGTCAGAAGATCCTTCCGTTCCAAGAAATATAAAGTTGAAATCAACTATGCCTCCAAAATTCCTCTGCGGGCTATTGCCAATGCCTTAAGAGGGAATGAAACCGACAATTATCAAGAAGCCATTAGGGTGCTTGATATTATACTGAGGCAACATGCCGCTAAACAAGGTTGTCTTCTTGTGCGCCAAAATTTCTTCCACAATGATGTTAGGAATTTCAAACCTGTGAACGGTGGGGTACTTGGGGTCCGAGGGCTGCATTCCAGCTTTAGAACAACACAAAGCGGACTTTCTCTAAATATAGATGTGTCCACAACTACGATTGTCCAGCCCGGGCCTGTTTTGGACTTCTTGCTCTCAAATCAAAATGTGACAGATCCTTACCATCTTGATTGGGCTAAGGCCAAAAGGACTCTGAAAAATTTAAGGATCAAAACCAGCCCTTCAAACCAAGAGTACAAGATTATTGGGCTGAGTAACTTGCCTTGCAAGAAAGAAACATTTACTCTGAAGAAGAAAGGGGGTGGAGAAGATGACTCAGAAGAGATCACTGTTTATGATTATTTCGTAAAGCGACGAAATATTGCTCTGAAGTGTTCTGCTAACTTTCCGTGTATTAATGTTGGGAAGCCCAAAAGACCCACTTATGTCCCAATTGAGCTTTCTGATCTGGTTTCCCTTCAACGGTACACAAAAGCCCTATCCACTCACCAACGGTCTTCTCTTGTTCAGATGTCGAGGCAGAATCCTCAACAACGGATGAGGGATTTGTCCGATGCGCAGAGAACCAGTAACTACAGTTCCGATCCCATGCTAAGGAACTGTGGCATTTCTATAACTACTCGGTTCACACAAGTGGATGGGAGAGTTTTGGATGCACCAAGGCTGAAGTTCGGAAATGGTGAAAATTTCAATCCCAGAAACGGGAAATGGAATCTGAATGACAAGATAATTGTGGAACCTGTCAAAATAAGTAAGTGGGCTGTGGTGAACTTCTCTGCTTCTTGCGATTTGCAAAGGCTTGTGGATGGTCTGAAAAAATGCGGAAGAATGAAAGGAATTCAAGTTGAAAGTCCTTTCGGTATGTTTGAAGAGCAAGATCAGTTCAGCAGTTCATCACCCGTCTTACGTGTTGAGGAAATGCTTAAGCAAGTTAGGTCCGAACATCCTAAGGAGCGGCCTCAATTTCTCCTCTGTGTGCTTCCTGAGAAAAAGAACTCAGAACTTTATGGTCCATGGAAGAAGAAGAATCTTGTTGAGCATGGAATTGTTACTCAGTGCATAGCGCCTGCTAAGCTAAACGACCAATACCTGACCAATGTTTTAATGAAGATCAATGCTAAGCTTGGTGGAATGAATTCTCTGTTAGGGATTGAACGTTCTCCATCCGACCATATTATATTTAATGTTCCGACTCTAATTTTGGGCATGGATGTTTCTCATGGTTCACCTGGTCAAGACATTCCATCCATCGCTGCGGTCGTAGGCTCAAGACAATGGCCACTGATATCTAAATATAAGGCATGTGTACGAAGTCAGGGTTCTAAGGTTGAAATGATTGACAATTTGTTCAAGCCTGTGCCTGGTCCAAAGGGTACAACCAAGGATGAAGGAATTATAAGGGAACTTGTAATGGAATTCTATTTAAGTTCTAGGAAAATACCAAAAAATATTATCATTTTCAGGGATGGTGTGAGTGAGTCTCAGTTCAACCAAGTCTTGAACATTGAACTCGGCCAAATCATTGAGGCCTGTAAATTTCATGATGAAAGTTGGAAACCCAAGTTTACTGTTATTGTTGCCCAAAAGAACCATCATACAAAGTTCTTCCAACCTAGATCTTCCGACAATGTGCCGGCGGGGACTGTTGTGGACAACACCATTTGTCATCCTAGGAATTATGATTTCTATATGTGTGCTCATGCAGGAAGCATTGGGACGAGTAGGCCAACGCATTATCATGTTCTGTGGGATGAGATTGGCTTTTCTACCGATGATCTACAGGAGCTTGTCCACTCTCTGTCCTATGTTTGTCAGAGGACCACCACTGCGATATCTATAGTTGCTCCAATCTGCTATGCGCACTTGGCTGCTGCACAAGTTGGACAGTTCATGAAGTTTGAGGATAGATCTGAAACATCATCCATTCGCGGTGGAGCAAACGCTTCTCCTGTCCCAGAGCTTCCAAAGTTACAAGAGGATGTCTGCAATTCCATGTTTTTTGTTTGA 2718 0.4308 MASHDNEECLPPPPSIVPSHVKPLKIEPELVKNKDPPRVPIARRELGSKGRALTLLTNHFKVEVANTDGYFYQYSVALFYEDGRPVEAKGSGRKILDRVQETYKSELNGKDLAYDGEKTLFTMGSLAQNKLEFTVVLEDVTSSRNTRNLSPDACGSSNDVDRKRVRRSFRSKKYKVEINYASKIPLRAIANALRGNETDNYQEAIRVLDIILRQHAAKQGCLLVRQNFFHNDVRNFKPVNGGVLGVRGLHSSFRTTQSGLSLNIDVSTTTIVQPGPVLDFLLSNQNVTDPYHLDWAKAKRTLKNLRIKTSPSNQEYKIIGLSNLPCKKETFTLKKKGGGEDDSEEITVYDYFVKRRNIALKCSANFPCINVGKPKRPTYVPIELSDLVSLQRYTKALSTHQRSSLVQMSRQNPQQRMRDLSDAQRTSNYSSDPMLRNCGISITTRFTQVDGRVLDAPRLKFGNGENFNPRNGKWNLNDKIIVEPVKISKWAVVNFSASCDLQRLVDGLKKCGRMKGIQVESPFGMFEEQDQFSSSSPVLRVEEMLKQVRSEHPKERPQFLLCVLPEKKNSELYGPWKKKNLVEHGIVTQCIAPAKLNDQYLTNVLMKINAKLGGMNSLLGIERSPSDHIIFNVPTLILGMDVSHGSPGQDIPSIAAVVGSRQWPLISKYKACVRSQGSKVEMIDNLFKPVPGPKGTTKDEGIIRELVMEFYLSSRKIPKNIIIFRDGVSESQFNQVLNIELGQIIEACKFHDESWKPKFTVIVAQKNHHTKFFQPRSSDNVPAGTVVDNTICHPRNYDFYMCAHAGSIGTSRPTHYHVLWDEIGFSTDDLQELVHSLSYVCQRTTTAISIVAPICYAHLAAAQVGQFMKFEDRSETSSIRGGANASPVPELPKLQEDVCNSMFFV 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03025 905 ProSiteProfiles PAZ domain profile. 299 389 IPR003100 GO:0005515
Vivi7g03025 905 Pfam PAZ domain 278 405 IPR003100 GO:0005515
Vivi7g03025 905 Pfam N-terminal domain of argonaute 52 212 IPR032474 -
Vivi7g03025 905 Gene3D - 627 905 IPR036397 GO:0003676
Vivi7g03025 905 SMART Piwi_a_2 559 869 IPR003165 GO:0003676
Vivi7g03025 905 Pfam Argonaute linker 1 domain 224 272 IPR014811 -
Vivi7g03025 905 CDD Piwi_ago-like 433 868 IPR045246 -
Vivi7g03025 905 FunFam Protein argonaute 3 628 905 - -
Vivi7g03025 905 Pfam Argonaute linker 2 domain 415 461 IPR032472 -
Vivi7g03025 905 MobiDBLite consensus disorder prediction 401 428 - -
Vivi7g03025 905 Pfam Piwi domain 560 869 IPR003165 GO:0003676
Vivi7g03025 905 SUPERFAMILY Ribonuclease H-like 548 867 IPR012337 -
Vivi7g03025 905 Gene3D - 453 619 - -
Vivi7g03025 905 FunFam Protein argonaute 7 269 393 - -
Vivi7g03025 905 SUPERFAMILY PAZ domain 269 429 IPR036085 GO:0005515
Vivi7g03025 905 ProSiteProfiles Piwi domain profile. 559 869 IPR003165 GO:0003676
Vivi7g03025 905 CDD PAZ_argonaute_like 274 388 - -
Vivi7g03025 905 Gene3D paz domain 268 393 - -
Vivi7g03025 905 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 37 871 - -
Vivi7g03025 905 SMART DUF1785_2 222 274 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03025 Vivi-Chr7 95014152 95020098 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03025 47 904 Eukaryotic Initiation Factors Gene Family AT1G48410 32.965 7.46e-145 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03025 K11593 - gmx:100779439 1320.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03025 7 95014152 95020098 Vivi7g03025 7 95014152 95020098 ECH