Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03017 ATGGGGATTCAAACAATGGGTTCTCAAAGTAATGGGCAACAGTCTTGTTTACCGGCTAATCAGTTAGTTAAACAAAATTCATGGTATGGTCTTACTCTTGATGAGGTTAACAATTTACTCGGAGATTTGGGGAAGCCGTTAGGGAGCATGAATCTCGACGAGCTTCTTCAGAATGTATGGACTGCGGAAGGGAATAATGTTGTAGGGATAGAGAGGGAGCACGTTTCTTCTTCGTCATGTTCTCTTCAACGTCAGGCTAGTATGACGTTGGCTCGGGCTTTGAGTGGGAAGACGGTGGATGATGTATGGAGAGAAATCCAGCATGGTCAGAAGAAACAGTATGGCGACGACGAGAAGATTGTGGATAGAGAAATGACTCTTGGTGATACGACATTGGAAGATTTTTTAGTGCAAGCGGGGCTTTTCGCGGGAGCTTCTGATAGTTCGACAGCGGGGTTGGATTCAATGGATGCAGTTATTCCTCAGAGTTTTCAACAGAAAACAGGCTTGTTATCGTCTTCTTCTATTAGTAGTATGTCAGACGCGAAACCAGGTCGCAGAAGGGATACCTCGGATGCATATGAGAAGGCTCTCGAAAGGAGGCTGAAAAGGAAAATCAAGAATAGGGAATCTGCCGCGCGATCACGGGCGAGAAAACAGGCTTACCATAATGAACTGGTTACCAAGGTTACTCGACTAGAAGAAGTAAATATACAGCTCAAGAAAGAGAAGGAGTTCGAGCAGGGGCTACCACCAGAACCATCACAGGAACCAAGATATCGTCTTCGAAGAATAAGTTCCGCCCTTTTCTGA 813 0.4526 MGIQTMGSQSNGQQSCLPANQLVKQNSWYGLTLDEVNNLLGDLGKPLGSMNLDELLQNVWTAEGNNVVGIEREHVSSSSCSLQRQASMTLARALSGKTVDDVWREIQHGQKKQYGDDEKIVDREMTLGDTTLEDFLVQAGLFAGASDSSTAGLDSMDAVIPQSFQQKTGLLSSSSISSMSDAKPGRRRDTSDAYEKALERRLKRKIKNRESAARSRARKQAYHNELVTKVTRLEEVNIQLKKEKEFEQGLPPEPSQEPRYRLRRISSALF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03017 270 Pfam bZIP transcription factor 200 243 IPR004827 GO:0003700|GO:0006355
Vivi7g03017 270 CDD bZIP_plant_BZIP46 200 248 - -
Vivi7g03017 270 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 243 IPR004827 GO:0003700|GO:0006355
Vivi7g03017 270 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 24 265 IPR043452 GO:0003700|GO:0045893
Vivi7g03017 270 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 203 218 IPR004827 GO:0003700|GO:0006355
Vivi7g03017 270 Gene3D - 198 248 - -
Vivi7g03017 270 MobiDBLite consensus disorder prediction 243 270 - -
Vivi7g03017 270 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 198 250 - -
Vivi7g03017 270 SMART brlzneu 196 268 IPR004827 GO:0003700|GO:0006355
Vivi7g03017 270 SUPERFAMILY Leucine zipper domain 200 246 IPR046347 GO:0003700|GO:0006355
Vivi7g03017 270 MobiDBLite consensus disorder prediction 170 192 - -
Vivi7g03017 270 Coils Coil 223 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03017 Vivi-Chr7 94959621 94961826 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03017 22 270 bZIP Transcription Factor Family AT3G56850 43.662 2.60e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi7g03017 bZIP_1 1.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03017 K14432 - gmx:100798549 373.629