Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03012 ATGACACTATCTAGTGAACACAAATCAACTATAATGGGGTTACTTCATAGGCCAATGTTTTTCAATTTGATCCTATTCATTGGTTATTATTTTTGTTTTGGCAGAGCCATTGATTGTGGTGGAAATAAAATTGCTCAAACCATTATTGTTGATCAACAAGGAAAAGGAACATTCACAAAGATTCAACCTGCCATTGATTCTGTTAAAATGAACAATGATCGATGGATTAAAATTCACTTAAATCCTGGAACATATGTAGAAAGTATTTATATTCCTGATGGTAAGCCATGTATCATTTTAGAAGGATCTGATAGAAGAACCACAAAAATTACATATGGTGATAGCAGTGCAACAACAACATTCTTTTCCAAACCACCTAATATGGTTTTTAGTGGTATTACATTTGAGAATACACATGGAACTGAAAGACCTGCAATAGCGGCTAAGTTTAATGGTGATAAAGTAGCTATCTTTAATTGTGATTTTTTGGGTTATCAAGACACTTTATTTGACGCATCAGGGATTCATTATTATAAGAATTGTTATATTCGAGGTGAAGTTGATTTTATTTGGGGTGAAAGTCGGTCTTATTACGAGGATTGTGTGATAGACGCAAGACAAGATACTTCTAGACCTACGGGCTTTATCACAGCCCAACGTAGAAATTCACCAAATGATCAAGGTGGTTTTGTTTTTAAAGGAGGGAAAATTGATGGAGTTGGTAAAGTTCTTTTAGGAAGAGCATATGGTCCTTATCCAAGAGTTATATTTTGGAACATGGACATTTCTTCAGTGGTACTTCCCCTGGGATGGGATCCTTGGCAATATAAAGGCCAAGAAAACAACTTTATTTTTGCGGAAGTTGGTTGTACGGGACCAGGATCCAATACTCAAGGGCGTGTCAATTGGGAGAAGAAACCTAATGAAATAAATATAAATGAATATTCTTTACAATCTTTCATAAATCAAGATGGATGGCTCTCCAACTTACCTCCTATATCTATGTAA 1008 0.3502 MTLSSEHKSTIMGLLHRPMFFNLILFIGYYFCFGRAIDCGGNKIAQTIIVDQQGKGTFTKIQPAIDSVKMNNDRWIKIHLNPGTYVESIYIPDGKPCIILEGSDRRTTKITYGDSSATTTFFSKPPNMVFSGITFENTHGTERPAIAAKFNGDKVAIFNCDFLGYQDTLFDASGIHYYKNCYIRGEVDFIWGESRSYYEDCVIDARQDTSRPTGFITAQRRNSPNDQGGFVFKGGKIDGVGKVLLGRAYGPYPRVIFWNMDISSVVLPLGWDPWQYKGQENNFIFAEVGCTGPGSNTQGRVNWEKKPNEININEYSLQSFINQDGWLSNLPPISM 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03012 335 Pfam Pectinesterase 48 323 IPR000070 GO:0030599|GO:0042545
Vivi7g03012 335 Gene3D - 41 331 IPR012334 -
Vivi7g03012 335 FunFam Pectinesterase 42 331 - -
Vivi7g03012 335 SUPERFAMILY Pectin lyase-like 44 328 IPR011050 -
Vivi7g03012 335 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 44 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03012 Vivi-Chr7 94918597 94920199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03012 20 280 Carbohydrate Esterase AT2G19150 42.701 2.46e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03012 - - tpra:123922273 483.026