Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03004 ATGAGTCAGCCAAAGATTAAGCGTAGAGTCGGTATATACGAGATTGGGAGGACTATTGGGGAGGGATCCTTCGCAAAAGTGAAATTCGCAAGGAACTCTAAGACCGGTGAAGCCGTGGCTATCAAAATTATTGACAAGGAGAAAGTTCTCAGACACAAGATGTCTGAACAGATCAAGCGGGAAGTAGCTACGATGAAGTTAATCAAGCATCCAAATGTTGTTAGACTATATGAGGTCATGGGAAGCCGAACAAAAATATATATTGTATTGGAGTTTGTGACTGGCGGGGAGCTTTTCGACAAAATTGTAAACCATGGACGGATGGGTGAAAATGAAGCGCGTAGGTATTTCCAGCAGCTTATAAATGTTGTCGATTATTGTCATAGCAGAGGAGTCTTTCACCGAGACCTTAAGCCAGAAAATCTGCTTTTAGATTGTAATGGTGATCTTAAAGTCTCCGATTTCGGGTTGAGTGCACTCTCCCAGCAAGTTAGGGACGATGGACTTCTCCATACGACATGCGGAACTCCGAATTATGTTGCTCCAGAGGTTCTTACTGATAGAGGCTATGATGGAGCGAATGCGGACATATGGTCATGCGGAGTGATCCTCTTTGTATTGGTTGCAGGTTACTTACCTTTTGATGATCCTAATCTTATGGAACTCTATAAAAAAATCTCGTCTGCCAGTTTTACTTGCCCCCCGTGGCTTTCTTTCAGTGCGAGGAAATTAATCACTCGAATCTTGGATCCCAATCCTACGACGCGTATCACAATGGCCGAGATTTTGGAAGATGAATGGTTTAAGAAAGACTATAAGCCTGCGGTTTTTGAAGAGAGTGGCGAAACCAACCTCGATGATGTAGAAGCCGTCTTTAAAGATTCAGAAGAGCACCATGTGAAGGAAAAGAAAGAAGAGCAGCCAACATCGATGAATGCGTTTGAATTGATATCCATGTCGAAAGGACTCAACCTCGAAAACTTGTTTGATATAGAACAGGGATTTAAAAGGGAAACAAGGTTTACATCAACATCTTCGGCCGACGTGATAATCAACAAGATTGAAGAAGCTGCTAAACCTCTCGGCTTCGATGTACAGAAGAAAAACTTCAAGATGAGGCTTGCGAATTCGAAAGCCGGAAGGAAAGGAAACCTTAATGTTGCCACAGAGGTGTTTCAAGTGGCACCTTCTCTTCACATGGTTGAAGTAAGGAAAGCTAAAGGAGATACATTGGAGTTTCATAAGTTCTACAAGAAACTGTCAACAAGTTTGGAAGATGTTGTTTGGAAAACAGATGATGATATGCCAAAGAAAGAAGCAAAAGAAGCAAAGGAAGCAAAAGAAGCAAAAGCAGCAAAATGA 1362 0.42 MSQPKIKRRVGIYEIGRTIGEGSFAKVKFARNSKTGEAVAIKIIDKEKVLRHKMSEQIKREVATMKLIKHPNVVRLYEVMGSRTKIYIVLEFVTGGELFDKIVNHGRMGENEARRYFQQLINVVDYCHSRGVFHRDLKPENLLLDCNGDLKVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLTDRGYDGANADIWSCGVILFVLVAGYLPFDDPNLMELYKKISSASFTCPPWLSFSARKLITRILDPNPTTRITMAEILEDEWFKKDYKPAVFEESGETNLDDVEAVFKDSEEHHVKEKKEEQPTSMNAFELISMSKGLNLENLFDIEQGFKRETRFTSTSSADVIINKIEEAAKPLGFDVQKKNFKMRLANSKAGRKGNLNVATEVFQVAPSLHMVEVRKAKGDTLEFHKFYKKLSTSLEDVVWKTDDDMPKKEAKEAKEAKEAKAAK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03004 453 Coils Coil 437 453 - -
Vivi7g03004 453 Pfam NAF domain 308 367 IPR004041 GO:0007165
Vivi7g03004 453 CDD STKc_SnRK3 13 267 - -
Vivi7g03004 453 CDD CIPK_C 312 426 - -
Vivi7g03004 453 Gene3D Kinase associated domain 1, KA1 305 430 - -
Vivi7g03004 453 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Vivi7g03004 453 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 419 - -
Vivi7g03004 453 FunFam Non-specific serine/threonine protein kinase 305 430 - -
Vivi7g03004 453 MobiDBLite consensus disorder prediction 432 453 - -
Vivi7g03004 453 FunFam Non-specific serine/threonine protein kinase 6 309 - -
Vivi7g03004 453 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03004 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Vivi7g03004 453 Gene3D Transferase(Phosphotransferase) domain 1 93 275 - -
Vivi7g03004 453 SUPERFAMILY Protein kinase-like (PK-like) 11 285 IPR011009 -
Vivi7g03004 453 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Vivi7g03004 453 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03004 453 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Vivi7g03004 453 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03004 453 Gene3D Phosphorylase Kinase; domain 1 3 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03004 Vivi-Chr7 94884091 94887803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03004 5 411 CBL-interacting serine-threonine protein kinases AT2G26980 76.413 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vivi7g03004 Pkinase 4.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03004 - - gmx:100794566 795.808