Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03003 ATGAGTCAGCCAAAGATTAAGCGTAGAGTCGGTATATACGAGATTGGGAGGACTATTGGGGAGGGATCCTTCGCAAAAGTGAAATTCGCAAGGAACTCTAAGACCGGTGAAGCCGTGGCTATCAAAATTATTGACAAGGAGAAAGTTCTCAGACACAAGATGTCTGAACAGATCAAGCGGGAAGTAGCTACGATGAAGTTAATCAAGCATCCAAATGTTGTTAGACTATATGAGGTCATGGGAAGCCGAACAAAAATATATATTGTATTGGAGTTTGTGACTGGCGGGGAGCTTTTCGACAAAATTGTAAACCATGGACGGATGGGTGAAAATGAAGCGCGTAGGTATTTCCAGCAGCTTATAAATGTTGTCGATTATTGTCATAGCAGAGGAGTCTTTCACCGAGACCTTAAGCCAGAAAATCTGCTTTTAGATTGTAATGGTGATCTTAAAGTCTCCGATTTCGGGTTGAGTGCACTCTCCCAGCAAGTTAGGGACGATGGACTTCTCCATACGACATGCGGAACTCCGAATTATGTTGCTCCAGAGGTTCTTACTGATAGAGGCTATGATGGAGCGAATGCGGACATATGGTCATGCGGAGTGATCCTCTTTGTATTGGTTGCAGGTTACTTACCTTTTGATGATCCTAATCTTATGGAACTCTATAAAAAAATCTCGTCTGCCAGTTTTACTTGCCCCCCGTGGCTTTCTTTCAGTGCGAGGAAATTAATCACTCGAATCTTGGATCCCAATCCTACGACGCGTATCACAATGGCCGAGATTTTGGAAGATGAATGGTTTAAGAAAGACTATAAGCCTGCGGTTTTTGAAGAGAGTGGCGAAACCAACCTCGATGATGTAGAAGCCGTCTTTAAAGATTCAGAACCTATTATTCAGGAGCACCATGTGAAGGAAAAGAAAGAAGAGCAGCCAACATCGATGAATGCGTTTGAATTGATATCCATGTCGAAAGGACTCAACCTCGAAAACTTGTTTGATATAGAACAGGGATTTAAAAGGGAAACAAGGTTTACATCAACATCTTCGGCCGACGTGATAATCAACAAGATTGAAGAAGCTGCTAAACCTCTCGGCTTCGATGTACAGAAGAAAAACTTCAAGATGAGGCTTGCGAATTCGAAAGCCGGAAGGAAAGGAAACCTTAATGTTGCCACAGAGGTGTTTCAAGTGGCACCTTCTCTTCACATGGTTGAAGTAAGGAAAGCTAAAGGAGATACATTGGAGTTTCATAAGTTCTACAAGAAACTGTCAACAAGTTTGGAAGATGTTGTTTGGAAAACAGATGATGATATGCCAAAGAAAGAAGCAAAAGAAGCAAAGGAAGCAAAAGAAGCAAAAGCAGCAAAATGA 1374 0.4192 MSQPKIKRRVGIYEIGRTIGEGSFAKVKFARNSKTGEAVAIKIIDKEKVLRHKMSEQIKREVATMKLIKHPNVVRLYEVMGSRTKIYIVLEFVTGGELFDKIVNHGRMGENEARRYFQQLINVVDYCHSRGVFHRDLKPENLLLDCNGDLKVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLTDRGYDGANADIWSCGVILFVLVAGYLPFDDPNLMELYKKISSASFTCPPWLSFSARKLITRILDPNPTTRITMAEILEDEWFKKDYKPAVFEESGETNLDDVEAVFKDSEPIIQEHHVKEKKEEQPTSMNAFELISMSKGLNLENLFDIEQGFKRETRFTSTSSADVIINKIEEAAKPLGFDVQKKNFKMRLANSKAGRKGNLNVATEVFQVAPSLHMVEVRKAKGDTLEFHKFYKKLSTSLEDVVWKTDDDMPKKEAKEAKEAKEAKAAK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03003 457 Gene3D Kinase associated domain 1, KA1 309 434 - -
Vivi7g03003 457 CDD STKc_SnRK3 13 267 - -
Vivi7g03003 457 FunFam Non-specific serine/threonine protein kinase 6 312 - -
Vivi7g03003 457 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03003 457 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03003 457 Gene3D Transferase(Phosphotransferase) domain 1 93 275 - -
Vivi7g03003 457 FunFam Non-specific serine/threonine protein kinase 309 434 - -
Vivi7g03003 457 Pfam NAF domain 312 371 IPR004041 GO:0007165
Vivi7g03003 457 CDD CIPK_C 316 430 - -
Vivi7g03003 457 MobiDBLite consensus disorder prediction 436 457 - -
Vivi7g03003 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Vivi7g03003 457 SUPERFAMILY Protein kinase-like (PK-like) 11 285 IPR011009 -
Vivi7g03003 457 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Vivi7g03003 457 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Vivi7g03003 457 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03003 457 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 423 - -
Vivi7g03003 457 Gene3D Phosphorylase Kinase; domain 1 3 92 - -
Vivi7g03003 457 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Vivi7g03003 457 Coils Coil 441 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03003 Vivi-Chr7 94884091 94887803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03003 5 415 CBL-interacting serine-threonine protein kinases AT2G26980 75.669 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vivi7g03003 Pkinase 4.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03003 - - gmx:100794566 792.341