Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02990 ATGGCATCTTCATCTTTGCAACAAGAAAAAGGCAATCATGGTGATGACACTGGAAATATTGTGCTGAAAAAAGGAACATGGTCATCTCAAGAGGATCAAGTATTAGTAGAATATGTGAAAAATTATGGAGCTAGAAAGTGGGATTCTGTACGAAAGAAAACAAAACTTATTCGAGATGGAAAAAGTTGTCGTTTAAGATGGTTAAATCATCTAAAACCAACTTTGAAAAAGTGTTCCTTCAGTGAAGAAGAAAAGGAGGAACTTATTTCTCTCTATAAAGAATTAGGACCCAAATGGTCTGGCATGGTTTCAAAGTTTCCTGGAAGAACCGATAACGAGTTAAAGAATTTTATTAATTCAAGAAAAAGAAGTTTAAAAAATTCTAGAAAGAACCTAGCTCGAGAAAGCATAAACCATGTTGATGAGTTGAATGATAATGTTGGAGAAATTAGATTGAAGAAGGGTTCTAGTAACCAAAATAATAATGCCTTCGAAGAAGAAGAAATGACTCTACCAAGAGTGGAATTTGATCATCAAAACATTATGCACGCAAACTATCTTAATCAAATTTATGATGAAGCAAATATAAATTTTAAACCACTTTCAACATTGATTGATGATCCAAATATGCTATACAATAATGTGGGAAGCTTTTCTTTAAGCAATTCTAGAGAGTTCCTGATTCCCGAAAGTATAAACCTTGTTGATGAGTTGATTGATGATATTGAAAGGCTTAGTATGATGAAGGGTTCTAGTAACCAAAATAATATTGTCTTTGAAGAAGAAGAAATGACTCTACCAAGAATGGATTTTGATGATCAAGATATTTTGTATGCAAACTATCTTGATCCAATTTATGAGGAGGCAAATATCAATTTTGAACCATTTTCAACCTTGGTTGATAATTCAAATATGCAATACAATAATGTGGGAAGCTTTTCTTTAAGCAATTCTAGAGAGTTCCTCATTCCCGAAAGCATAAACAATGTTGATCAATTGATTGCTAGTGTTGGAGAATTTAGTATGATGAAGGATTCTAGTAACCAAAATAATAATGCCTCCGAAGAAGAAATGACTTTACCAAGAGTGGAATCCAATCATCAAGACATTATGCATGCAAACTATCTTGAGGAAAATATCAACTTCGAACAAATTTCAACGTTGGTTGATGATTCAAATATGTTATACAATAATGTGGAAAGTTCTTCTTTAAGCAATCATATTGTCCCAGCATTGAATGATAGGTTTTCTACACACCCAGAATGTTCGTACTTTCAAAATGAGAAAAATATCAACAACCTTGAACCACTTTCAAAGTTGGATGATGATTTAAATATGCCATATAATAATGTGGAAAATACTTCTTTATCCATGGCACCGGATCTTCTTACACTCCCAGAATGTTCCCACATTCAAGATAGGGAAGATACACTTCCATCATTTCCATCATGTAATATGGTTTTCGATCAAGATCTTCCTCCAATTCCACAATGTTCATACAATCTTGATATGGATTATCAACTTCCTTCGGAGATGTTTTTTGACCAATATCCTCAAAATCCAATTCAATCATCTGATGAGATTCAATATGAGATATTAGAACCTTGGTTACTAGCTGAATGCGTTCCTTTTTGGCCCTTTGATCAATGA 1650 0.3309 MASSSLQQEKGNHGDDTGNIVLKKGTWSSQEDQVLVEYVKNYGARKWDSVRKKTKLIRDGKSCRLRWLNHLKPTLKKCSFSEEEKEELISLYKELGPKWSGMVSKFPGRTDNELKNFINSRKRSLKNSRKNLARESINHVDELNDNVGEIRLKKGSSNQNNNAFEEEEMTLPRVEFDHQNIMHANYLNQIYDEANINFKPLSTLIDDPNMLYNNVGSFSLSNSREFLIPESINLVDELIDDIERLSMMKGSSNQNNIVFEEEEMTLPRMDFDDQDILYANYLDPIYEEANINFEPFSTLVDNSNMQYNNVGSFSLSNSREFLIPESINNVDQLIASVGEFSMMKDSSNQNNNASEEEMTLPRVESNHQDIMHANYLEENINFEQISTLVDDSNMLYNNVESSSLSNHIVPALNDRFSTHPECSYFQNEKNINNLEPLSKLDDDLNMPYNNVENTSLSMAPDLLTLPECSHIQDREDTLPSFPSCNMVFDQDLPPIPQCSYNLDMDYQLPSEMFFDQYPQNPIQSSDEIQYEILEPWLLAECVPFWPFDQ 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02990 549 ProSiteProfiles Myb-like domain profile. 72 116 IPR001005 -
Vivi7g02990 549 MobiDBLite consensus disorder prediction 1 20 - -
Vivi7g02990 549 Gene3D - 23 76 - -
Vivi7g02990 549 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 9 223 - -
Vivi7g02990 549 SMART sant 76 124 IPR001005 -
Vivi7g02990 549 SMART sant 23 73 IPR001005 -
Vivi7g02990 549 Gene3D - 78 145 - -
Vivi7g02990 549 Pfam Myb-like DNA-binding domain 27 88 - -
Vivi7g02990 549 CDD SANT 79 122 IPR001005 -
Vivi7g02990 549 SUPERFAMILY Homeodomain-like 23 116 IPR009057 -
Vivi7g02990 549 CDD SANT 26 71 IPR001005 -
Vivi7g02990 549 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Vivi7g02990 549 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 126 IPR017930 -
Vivi7g02990 549 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 75 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02990 Vivi-Chr7 94660615 94667263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02990 16 126 MYB Transcription Factor Family AT4G26930 52.252 4.18e-36 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi7g02990 Myb_DNA-bind_6 2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02990 K09422 - vvo:131619741 1048.5